Gene Smed_5705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5705 
Symbol 
ID5320007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp680781 
End bp681185 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content61% 
IMG OID640777430 
Producthypothetical protein 
Protein accessionYP_001314362 
Protein GI150377767 
COG category[S] Function unknown 
COG ID[COG5507] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0904367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTATT TCGACTGCTA TCTTGTTCCG GTTCCCACCG CCAAGCTGGA TGCCTACAAG 
CTGTTCTCGC AGCGGATGGC CAAGGTCTAT CGCGAATACG GGGCGCTTCG TGTGATTGAT
TGCATCCTCG ATCCCGAGAC GACGGATGGC ACGCAGTTCC ATGCCGAGGG CGCGCAAGCT
GATGTTCAGG GCGCCGAGCT CCGCGATTTC AACGCAGCGG CAGCCACCAA AGAGGGAGAA
ACCCTTATTT TGTCCTGGAC CGAGTGGCCG AGCAAAGACG CTCGCGACGA CCTGCTGCCG
CGCGTGCTGG CCGATCCGCG TGTTCAGCCG GAGGATGGCG AAAAGGCGAT CTGCGAGGGC
GCTCGCTTGG TCGCAGGCGG GTTCGCCAAG CTGCTCGATA CCTGA
 
Protein sequence
MSYFDCYLVP VPTAKLDAYK LFSQRMAKVY REYGALRVID CILDPETTDG TQFHAEGAQA 
DVQGAELRDF NAAAATKEGE TLILSWTEWP SKDARDDLLP RVLADPRVQP EDGEKAICEG
ARLVAGGFAK LLDT