| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5656 |
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| Symbol | |
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| ID | 5319958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 621791 |
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| End bp | 622789 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640777390 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001314322 |
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| Protein GI | 150377727 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCA CCGACTTCGG GGCTTTTCCG GCTGTCACGG GCGGCGCCTA TGCTGCTCCG
GCGACGAGCG AGCAGGCGAC CGCGCCGGAA CGTCCAGCCT GGTCCAACGT GAAGGCGCCC
GACGCGCGTT CCCAGCCAAC CGCTGCGGTC GCTTTTACGA ATGGGCGACG GGCGCTGAAG
GTCTTCCTCG CCAACCCCAA CGCGCTGTTT GGCACTGCAT TCCTTGCACT CGTCATCGCT
GTCGCGCTTT TGGCCCCAGT GCTCTATCCC GACGACCCCC TTTCGATGGT CGGAAAGCCG
TTCCTGTGGC CGGGCCAGGA TCCGACCTTC CCGCTCGGCA CGGATTCGCT CGGGCGGGAC
GTGCTGGCCG GCATTCTGCA CGGTTCGCGC ATCTCCCTGT TCGTGGGGCT GATGGCGACA
GCGCTCAGTC TCACCTTCGG AGTGTTCGTC GGCGCGATCG CCGGTTACTT CGCCGGCTGG
GTCGACGATC TCCTGGTCAG GCTCATCGAA ATCTTCCAGA CCTTGCCCAG CTTCGTGCTT
CTCGTAGTGC TTGTCGCGAT CGTCCAGCCC TCGGCTACCA CGGTGACGCT TGCAATCGCC
GTCATCTCCT GGCCGACGGT CGCGCGACTG ACCAGGGCCG AGTTTCGTAC GATCCGCGAG
AAGGACTTCG TCATGGCCGC CCGCAGTCTC GGGTTTGGTC ACGGGCGGAT CATCTTCCGC
GAGATCCTGC CGAACGCGCT GCCCCCGATC ATCGTCACCT CATCGGTCAT GGTCGCAACG
GCGATCCTGA TGGAATCGGC GCTGTCCTTC ATGGGGCTTG GCGACCCGAA CGTCGTGAGC
TGGGGTTCGA TGATCGGCAC TGGCCGCGAA CTGGTCCGAA CCGCCTGGTA TCTGACAGCC
CTTCCGGGTC TGGCGATCGT CTTCACGGTG CTTGCGCTCA ACCTCATCGG TGATGGGCTG
AACGACGCCC TCAACCCCCG CTTCACGCAG GATCGTTGA
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| Protein sequence | MSTTDFGAFP AVTGGAYAAP ATSEQATAPE RPAWSNVKAP DARSQPTAAV AFTNGRRALK
VFLANPNALF GTAFLALVIA VALLAPVLYP DDPLSMVGKP FLWPGQDPTF PLGTDSLGRD
VLAGILHGSR ISLFVGLMAT ALSLTFGVFV GAIAGYFAGW VDDLLVRLIE IFQTLPSFVL
LVVLVAIVQP SATTVTLAIA VISWPTVARL TRAEFRTIRE KDFVMAARSL GFGHGRIIFR
EILPNALPPI IVTSSVMVAT AILMESALSF MGLGDPNVVS WGSMIGTGRE LVRTAWYLTA
LPGLAIVFTV LALNLIGDGL NDALNPRFTQ DR
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