| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5609 |
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| Symbol | |
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| ID | 5319911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 578073 |
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| End bp | 578792 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777353 |
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| Product | high-affinity nickel-transporter |
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| Protein accession | YP_001314285 |
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| Protein GI | 150377690 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.437019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGCAAG CGATCGTAGA CATACAGCGG GACATCTATC TCGCCTTCGC TGAGCATATC
AAAACCTTCG CGAACGGCGG CGGATGGACG GCTTTCCTCT CCTTCCTGCC TATGGGGATC
GTCTTTGGCG CGGTGCACGC GATGACGCCC GGTCACAGCA AGGCTGTACT TGCCACCTAC
CTGACCGGCG CGTCGGCAGG TATGCGGCGC GGGCTGGTGG TCTCCCTGGC GTTGTCCGCC
ACGCATGTGA CGATGGCCGT GGTCATAGCC TTGTTCTCGC TGCCGCTGGT ATCGGTGATG
CTCGGTAGCG CCGGTTCGGC TCCGCTGCTC GAGGACGTGA GCCGGGGATT GCTCGGCCTC
ATCGGGGCGT GGATGCTGTG GAGCGCCTTC TTCCAGCCGC CGCATGTGCA CGGCGAAGGC
GAAGGTGTCG CCGTCGGCTT CATGGCCGGG CTGATCCCTT GCCCGTTGAC GCTGTTCGTC
ATGACCTTCG CCATGTCGCG CGGCGTACCC GAGGCCGGGA TCATGTTCGC GCTCGTCATG
ATGACGGGGG TGGCGATCAC CCTCTCCAGC GTGGCACTCG CGACCGTCTT CTTCCGGACG
CGGATAGAAA AATTGCTGGA GACCCGGCAT GCCTTGCTGA CCAAAGTCTC GAAGGCGGTC
GAGGCTTTCA CAGGGCTGAC CTTGGTGATC ATCGCAATGC GAGAGATTTT CATCCGTTGA
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| Protein sequence | MLQAIVDIQR DIYLAFAEHI KTFANGGGWT AFLSFLPMGI VFGAVHAMTP GHSKAVLATY
LTGASAGMRR GLVVSLALSA THVTMAVVIA LFSLPLVSVM LGSAGSAPLL EDVSRGLLGL
IGAWMLWSAF FQPPHVHGEG EGVAVGFMAG LIPCPLTLFV MTFAMSRGVP EAGIMFALVM
MTGVAITLSS VALATVFFRT RIEKLLETRH ALLTKVSKAV EAFTGLTLVI IAMREIFIR
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