| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5608 |
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| Symbol | |
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| ID | 5319910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 576858 |
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| End bp | 578051 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640777352 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001314284 |
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| Protein GI | 150377689 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.338314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGCGAA ATCACCCTGC CACGTTCCTC CTCGCGGCTC GTGCAGTCCG CGACATAGGC
GACGGCTTCG TATCCGTGCT GTTACCGATC TATCTGCTCG CGCTCGGATT TACTCCGCTT
GAGGTAGGCG TCATCGCAAC GGCATCGCTC CTTGGCTCGG CGCTGCTGAC GATATGTGTC
GGGTTCCTCG GAGCCCGGTA CGATCATCGC CAAATCTTGC TGGCCGGTGC GAGCCTCATG
ATTGCGACCG GCGTGACCTT TGCCGTTGTC CACGAATACG CGCTGCTTCT GGTCATCGCG
TTCGTCGGGA CGATCAATCC CTCGGCCGGC AGCGTCAGCG TATTCGTGCC GTTGGAGCAC
GCCGTGCTCA CACGCGAAAT CCCGGCGCGA GAGCGAACCG GGATGTTCGC GCGTTACAGC
CTTGTGGGGG CGTTCGCGGC TGCCGTTGGT GGACTGGCTG CGGCTGTACC TGACCTTCTG
GGGCCAATTG GCCTCGACCG GCTCGGGGGC ATCAGGGCCA TGTTCGTCGT TTACGCGCTT
CTGGGACTGC TCGGCGGTTT GCTCTACGCG CAAGTCCCGC GCCGCTCGGC ACCAGACGCG
AACGCTATGG CCGCGCTCGG CCCTTCGCGC CATATTGTTT TCAAGCTGGC GGCGCTGTTC
AGTCTCGATG CCTTCGCCGG TGGCTTCGTC GTCCAATCGC TGCTCGCGCT TTGGCTGTTC
GAGCGATTTG GCCTGTCGCT TTCAGAGGCG GGTGTTTTCT TCTTCTGGTC GGGCGTGCTG
TCGGCGCTGT CGTTTCCTGT GGCCGCATGG CTGTCGCGAC GCATCGGACT GATCAACACG
ATGGTGTTCA CACACATCCC GTCCAGCATC GCTTTAATGC TGGCGGCGCT TGCGCCCACA
CTATCCCTCG CGCTTGCCTT TCTGCTGGTC CGGGCCGCAC TGTCGCAGAT GGACGTGCCG
ACGCGCTCGT CCTACGTGAT GGCCGTCGTC ACCGAGGCGG AGCGAGCCGC CGCTGCAAGC
TTCACCTCGG TTCCGCGCAG CCTTGCCGCC TCGGTCGGTC CTGCACTGGC GGGCGCTCTC
TTCGCCGCCT CTTTCCGGGC ATCGCCGCTG CTTATCTGCG GCGCGTTGAA GATCGTCTAC
GACCTGCTGC TGCTGATGCA GTTCCGGCGG TTGAAGCCGC CGGAGGAATG CTGA
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| Protein sequence | MLRNHPATFL LAARAVRDIG DGFVSVLLPI YLLALGFTPL EVGVIATASL LGSALLTICV
GFLGARYDHR QILLAGASLM IATGVTFAVV HEYALLLVIA FVGTINPSAG SVSVFVPLEH
AVLTREIPAR ERTGMFARYS LVGAFAAAVG GLAAAVPDLL GPIGLDRLGG IRAMFVVYAL
LGLLGGLLYA QVPRRSAPDA NAMAALGPSR HIVFKLAALF SLDAFAGGFV VQSLLALWLF
ERFGLSLSEA GVFFFWSGVL SALSFPVAAW LSRRIGLINT MVFTHIPSSI ALMLAALAPT
LSLALAFLLV RAALSQMDVP TRSSYVMAVV TEAERAAAAS FTSVPRSLAA SVGPALAGAL
FAASFRASPL LICGALKIVY DLLLLMQFRR LKPPEEC
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