Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5571 |
Symbol | |
ID | 5319873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 537229 |
End bp | 538455 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640777319 |
Product | OsmC family protein |
Protein accession | YP_001314251 |
Protein GI | 150377656 |
COG category | [E] Amino acid transport and metabolism [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [COG1765] Predicted redox protein, regulator of disulfide bond formation |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0439292 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCATTCA AAACGCAACG GCTCCAATTT TCCGGTCATT CAGGCGCGAC GCTCAGCGCC CGCCTTGATC TGCCAAATGG GCCTTTGCGC GCCTACGCGC TTTTTGCCCA TTGCTTCACC TGTTCCAAGG ATCTGGCGGC AGCACGCCGG ATTGCAGTGG AGCTTGCGCG TGAAGGCATC GCTGTCCTGC GTTTTGATTT CACGGGGCTG GGATCGAGCG AAGGCGAATT CGCTTCAACG AATTTCTCCT CCAACGTTGC CGACCTTCTT TCAGCCGCGG ACTATTTACG CCAACACTAT GAGGCGCCAG CGGTGCTGAT CGGCCACTCG CTCGGTGGTG CAGCGGTCCT CACCGTCGCC GGGGACATTC CGGAAGTGCG CGCCGTAGCC ACCATAGGCG CGCCGGCTGA TGTCGGCCAC GTATTGAAGA ACTTCGGAGC GAGCCTCGAC GAGATCGAGA AGAACGGCGA GGCCGACGTC GATCTCGCCG GGCGCACGTT TCTCGTCAAA AGACAGTTTG TCGAGGACAC GCGTGCACAC CGCATCAAGG ATGCTGTTGC GGGGCTGAAA AGACCGCTCC TCGTCCTTCA CGCGCCGCTG GACCATACGG TCGGGATCGA GAACGCCACC GAGATCTTCG TCGCGGCGAG GCATCCGAAA AGCTTCATTT CGCTGGACAA GGCTGACCAC CTGCTCACCG ACCGTGAGGA TGCGGCCTTT GCCGGACGGA TCATTTCGGA ATGGCTGACA CGCTATCTTG CCGCCGACAC GCCGCAAGCC ACCGGGCCGA TCGAATATGT CCGCGTGAGG GAAACGGGCG AAGGAAAGTT TCAGAACGCT GTTCAGGCTG GCGGGCATCG GCTGTTCGCC GATGAACCCG AAAGCGTGGG CGGGCTTGAT TCCGGACCAT CGCCCTACGA CTTCCTGGCG GTCGCACTTG GCGCCTGCAC CTCGATGACG CTGCGCCTCT ATGCCGGCCA CAAGCAGCTG AAGCTCGGAC GCATCGCCGT CGACGTCTCG CATGCCAAGA CTCATGCGAA GGATTGCGAG GAGTGCACCG AGCTGGAACG CAGTGGCAGC GGCAGGATCG ATCGTTTCGA GCGCGTCATT TCCATCGATG GCGAGGTCTC GGAGGAGCTT CGCGAGAAGA TCGGCGAAAT CGCCGGCAAG TGCCCGGTCC ATCGCACGCT CGAAGCAGTG ACGAAGATAA AAACGGTCGT GAAGTAA
|
Protein sequence | MAFKTQRLQF SGHSGATLSA RLDLPNGPLR AYALFAHCFT CSKDLAAARR IAVELAREGI AVLRFDFTGL GSSEGEFAST NFSSNVADLL SAADYLRQHY EAPAVLIGHS LGGAAVLTVA GDIPEVRAVA TIGAPADVGH VLKNFGASLD EIEKNGEADV DLAGRTFLVK RQFVEDTRAH RIKDAVAGLK RPLLVLHAPL DHTVGIENAT EIFVAARHPK SFISLDKADH LLTDREDAAF AGRIISEWLT RYLAADTPQA TGPIEYVRVR ETGEGKFQNA VQAGGHRLFA DEPESVGGLD SGPSPYDFLA VALGACTSMT LRLYAGHKQL KLGRIAVDVS HAKTHAKDCE ECTELERSGS GRIDRFERVI SIDGEVSEEL REKIGEIAGK CPVHRTLEAV TKIKTVVK
|
| |