| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5539 |
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| Symbol | |
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| ID | 5319841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 503715 |
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| End bp | 504923 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640777290 |
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| Product | hypothetical protein |
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| Protein accession | YP_001314222 |
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| Protein GI | 150377627 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.188295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0555001 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGAC GAGTGGCCGA TCAACTCACA ATCGTTCTCG CAGGATCCGC TTCTCTTGCT
ATCGCAATGG GTGTTGGTCG TTTTGCGTTC ACCCCAATCT TGCCGATGAT GCTGCACGAC
GGAACGGTCG ATCTCACTGT TGCCGGAAGG CTCGCAACCG CAAACTACGT CGGGTACCTC
GTGGGAGCGT TGGCGGCGAT GCTAATACCG AAGGAGTGGC CGCAGACGAC GATTATCAAA
TCGGCTCTTC TCCTGACCGT CGTGCTGACT GCCTTGATGG CGCTTCCGTT CCCAACGACA
TGGACAGGAC TACGATTTCT CGCAGGCGTA GCATCGGCAA TCGGCTTTGT ATTCACGTCA
GGTTGGTGCC TGGCGGAGCT TACCGGTTCA ACCGCCTCGA TCGGCAGTGC GATCTTTACC
GGGCCCGGAG CGGGGATCGC CGTTTCTGGT CTAGCAGCCA GCGTGATGAC AGCATTGAGC
TTCACTGGGC AGGGGGCCTG GACGACATTT GCCGTGATGT CGGCGGCGAT CAGCGCACTT
ATCTGGCGTG TCTTTCGAAA GCCCGGCAGA GACGTGGAGC CATTTTATGT TGGTAAAGCG
AGGACGTCGG GTCGGGTCCC GCGAACCGAA ATGCCCATGT TCGCCGTTGC GTACGGGCTC
GCTGGCTTCG GTTACATCGT GACTGCTACA TACCTGCCTG TGATCGCGAA GAACGCAATA
CCGGATTCCC CTTTGCTGAC CGTCTTCTGG CCGCTGTTTG GCATTTCAGC CGTAGTGGGT
TCACTTCTGG CATCGCGTGT GCGGAAGAGC GCCGACGCTC GCCTATACCT CATTGGTTCG
TATCTCGTGC AAGCGGCAGG CGTAGCAATG TCTGTCGTGT GGGAGGACGC AGTCGGTCTT
GCCTTAAGCA GCATTCTAGT CGGTGTCCCG TTCACCGCGA TCAGCTATTT TGCCATGAAT
GAGGTCCGAC GGATCCGATC AAGTCATCAC GCCCGCTACA TGGGGCTGCT GACGGCGGTG
TTCGCCGTCG GCCAGATCAT GGGGCCGCCG GTCGTAGGCG CAATATTCGC CCGCCAGGTG
AACTCCGACA GTGCGTTTGC TCTCGCCCTA GGCATTGCAA GCATAACGTT GGTCGTAGGG
GCGGTGATCC TGGTGGCGAT GATCGTGATG TTCCCGGCCA GGGTTCATCA CAGGCCTCAG
GAGCGCTAG
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| Protein sequence | MSRRVADQLT IVLAGSASLA IAMGVGRFAF TPILPMMLHD GTVDLTVAGR LATANYVGYL
VGALAAMLIP KEWPQTTIIK SALLLTVVLT ALMALPFPTT WTGLRFLAGV ASAIGFVFTS
GWCLAELTGS TASIGSAIFT GPGAGIAVSG LAASVMTALS FTGQGAWTTF AVMSAAISAL
IWRVFRKPGR DVEPFYVGKA RTSGRVPRTE MPMFAVAYGL AGFGYIVTAT YLPVIAKNAI
PDSPLLTVFW PLFGISAVVG SLLASRVRKS ADARLYLIGS YLVQAAGVAM SVVWEDAVGL
ALSSILVGVP FTAISYFAMN EVRRIRSSHH ARYMGLLTAV FAVGQIMGPP VVGAIFARQV
NSDSAFALAL GIASITLVVG AVILVAMIVM FPARVHHRPQ ER
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