| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5408 |
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| Symbol | |
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| ID | 5319710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 371220 |
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| End bp | 372212 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640777174 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001314106 |
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| Protein GI | 150377511 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.123433 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCGA CCAACTTCCC TGCGCTAATC CAGCGCTTCT TCACTGACCG GCTCTGCACA
CAAATGGAGG CAAGCCAGCA CACCATCGCC GGCTACCGGG ACACATTCCG GTTGTTGATC
CGTTACGCTG GTTCACGGTG TGGGAAGCCG CCCACGAAGC TTACGATCGA AGATCTCGAC
GCCGATCTTG TCGCCGACTT CCTGAGCCAC GTTGAAACGA CGCGTGGTAA CACGGCTCGA
ACTCGCAATG CGCGCCTTGC TGCGATCCGT TCATTCTTCC GATACGTCGC GATGACCGAT
CCGACCTGGC TTCTCCATTG CCAGCGCATT CTCTCGATGC CAAGCAAGCG ATACGTGAAG
CGTAGCGTGA CGTTCCTCGA CGCACAGGAG ATAGCCGCGC TGCTGGTCGC GCCGGATCGA
ACAACGTGGG TGGGACGGCG TGATCACGCC CTGCTCTTGC TTGCGCTTCA GACCGGATTG
CGGGCATCCG AGCTGATCAG TCTGCGCTGC AAGGACGTGG TCCTTGGCGC AGGCGCCCAC
ATCCGTTGCG TCGGCAAGGG GCGAAAAGAA CGCAGCACTC CACTTCGCCG CGACACGGCA
AAACTGATCC AGGGCTGGAT TGGGGAGCGA CGTGACAGCG ATAGTCCCCT GTTCCCCTCG
ATCCGGGGCG AGCGGCTCAG TCGTGATGCG CTTGAACATC TGGTGCGCAA GCACTGCCTC
ACGGCATCCC GAACGTGTCC AAGCCTCGCA AGCAAACGTG TTACGCCGCA TACTTTGCGG
CACAGCACGG CGATGGAACT GCTTCATCAC GGAGTAGACC AATCCGTGAT CGCGCTCTGG
CTTGGGCATG AATCCGTGGA GACGACCCAG ATCTATATCC ACGCCGACAT GCGGCTCAAG
GAAAAGGCGC TCTCTCAGGT CGCCAGACCA GAAGCCCATC CTGGGCGGTA TCGTCCCAAC
GACGAACTGC TTGTGTTCCT TGAATCGCTC TGA
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| Protein sequence | MKATNFPALI QRFFTDRLCT QMEASQHTIA GYRDTFRLLI RYAGSRCGKP PTKLTIEDLD
ADLVADFLSH VETTRGNTAR TRNARLAAIR SFFRYVAMTD PTWLLHCQRI LSMPSKRYVK
RSVTFLDAQE IAALLVAPDR TTWVGRRDHA LLLLALQTGL RASELISLRC KDVVLGAGAH
IRCVGKGRKE RSTPLRRDTA KLIQGWIGER RDSDSPLFPS IRGERLSRDA LEHLVRKHCL
TASRTCPSLA SKRVTPHTLR HSTAMELLHH GVDQSVIALW LGHESVETTQ IYIHADMRLK
EKALSQVARP EAHPGRYRPN DELLVFLESL
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