Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5367 |
Symbol | |
ID | 5319669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 333016 |
End bp | 334749 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640777139 |
Product | peptidoglycan glycosyltransferase |
Protein accession | YP_001314071 |
Protein GI | 150377476 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.590235 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.451655 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGAAGC ACGCCTTCAC CCTTCGGAGC AGGGCACACA GCAGACGGGT GCGCATCATC TGCATCATGG CAGCGTTTGC TGCCATATTC ACCGGTATTT TTCTGCGACT CGTCCAGTTT GGAATGGAGC AGGAAGCGAG CCACGGGATC AGCATCACCT ATGACCGGGC TCCAGGTGGC CGGCCCGCAA TCGTCGATAG AAACGGGGAG CTGCTCGCGA CCGATATACC CATCGCGTCG CTCTTTATCG AGCCGCGGTC GATCCCAGAC CTGGACGAGG CGGTTGAAAA ACTCACCGGG ATTTTCCCCG AACTCGATGC CCGGGAGCTC CATTCGCGCC TGCGTAGCAA AGACGCCTTC ACCTGGATCA AGCGGCAGAT AACTCCGGAC AAGCAGCAGG CGGTCATCGA TTCCGGATTG GCAGCGATCG GCTTTCGCCC CGAAAACCGA CGGCTCTATC CGAACGGCTC ATTGGCTGCC CATATCCTTG GCGCCGTGGA CATCGACAAT CGGGGCATTG CGGGTATTGA AAAGTGGATT GATGCAAACT GGCTCGCGGA CCTGCGCGGT GCCGGGCTGG AACTCAAGGG ACGTGAACTC CAACGGATCG AGCTGTCGAT CGACCTGCGC GTCCAATACG CACTGGAGCA GGAGCTCGGC AAGGCCATCA CGAAATTCGG GGCTGCCGCG GGTGCCGGGC TCCTGCTCGA CGTCACCAAT GGCGAAGTTC TCGCGCTCGC CTCCTATCCG GACTTCGATC CGAACAATCC GGAGAATGCA TTCAAGCCAG ACCGAATAAA CCGCGTTACT GCTGGCGTCT TCGAGATGGG ATCGACCTTC AAGGCTCTGA CGACGGCAAT GGCTCTGGAA TCGGGCCGGT TTAATCTCGA ATCGGTGGTG GATGCGAGCA AGCCTTTGAA TTTCGGGAGG ATGCGCATCC ATGATTATCG CGGCAAGTAC AGACCGCTGA CCATTCCCGA AGCATTCGTG CACTCCTCCA ATATCGTCAT GGCGAAAATG GCGTTGGCCC TCGGACCGGA AGCGTCGAGG ACATTCCTCG GACGCTTCGG AGCCCTGTCG CCGCTTGCAA CCGAACTGCC GGAGAGCGCC GCACCGCTGC TGCCATCCTC GTGGAGTGAG GTGGCGACGG CAACGGTCTC ATTCGGCCAT GGGATTGCCG TTACGCCGCT GCAGGCCAGC ACTGCGGTGG CCGCTCTGGC GAACGGCGGC AGGCTGATCA GGCCCACTTT CATAAAGGAC AGCCCCGTTT CCGAACGGAC GATAGCGGAG GATCTCGTGT CGTCGGACAC CAGCGAGGCA ATTCGCCATC TTTTGCGCCT CAACACCGCT GTCGGGTCTG CAACGAGAGC CAATGTTCCC GGTTACGCAA TCGGCGGCAA GACCGGCACA GCCGAGAAAG TGGTCGGGGG CCGCTATTCC AGGGAGCTCA ACGTCACATC TTTCATGGGT ATCGTACCGG CGGACAATCC CAGATACCTG CTGCTCACCC TTTTGGACGA GCCCCGCGGA CTGCCCGAGA CATATGGCAA CCGAACCTCG GGCTGGAATG CGGTGCCGTT CGGCGGCGCC GTATTCCAGC GCATCCTCCC AATGCTCGTT GCGCCCACCT TTCCGCCGCC CGCGGGCACT GTCCAAGCGG TTCCCGCCGC GACCGAAGAA CCCGGTTCGC GAGGGACGGC AGCCGCACGA ACCTGGCTGC TCCGGCCCAG ATAA
|
Protein sequence | MRKHAFTLRS RAHSRRVRII CIMAAFAAIF TGIFLRLVQF GMEQEASHGI SITYDRAPGG RPAIVDRNGE LLATDIPIAS LFIEPRSIPD LDEAVEKLTG IFPELDAREL HSRLRSKDAF TWIKRQITPD KQQAVIDSGL AAIGFRPENR RLYPNGSLAA HILGAVDIDN RGIAGIEKWI DANWLADLRG AGLELKGREL QRIELSIDLR VQYALEQELG KAITKFGAAA GAGLLLDVTN GEVLALASYP DFDPNNPENA FKPDRINRVT AGVFEMGSTF KALTTAMALE SGRFNLESVV DASKPLNFGR MRIHDYRGKY RPLTIPEAFV HSSNIVMAKM ALALGPEASR TFLGRFGALS PLATELPESA APLLPSSWSE VATATVSFGH GIAVTPLQAS TAVAALANGG RLIRPTFIKD SPVSERTIAE DLVSSDTSEA IRHLLRLNTA VGSATRANVP GYAIGGKTGT AEKVVGGRYS RELNVTSFMG IVPADNPRYL LLTLLDEPRG LPETYGNRTS GWNAVPFGGA VFQRILPMLV APTFPPPAGT VQAVPAATEE PGSRGTAAAR TWLLRPR
|
| |