| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5331 |
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| Symbol | |
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| ID | 5319633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 290410 |
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| End bp | 292599 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640777104 |
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| Product | catalase/peroxidase HPI |
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| Protein accession | YP_001314036 |
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| Protein GI | 150377441 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0376] Catalase (peroxidase I) |
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| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.850303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGG ATCAGAAGAC CGACAATGCG GGCAAGTGTC CCGTCGCACA TACGGCGCCG
AGGGGCAGAT CGAACCGCGA CTGGTGGCCG GACCAGCTGG ATGTTCAGGT TCTGCACCGG
CATTCCGATC TCTCCGATCC GATGGGCAAG TCGTTCAATT ACGCCGAGGA ATTCAGGAAG
CTCGACCTGG ATGCGTTGAA GCGGGACCTG CATGCCCTGA TGACTGACTC GCAGGACTGG
TGGCCGGCCG ATTTCGGCCA CTATGGCGGG CTTTTCATCC GCATGGCATG GCACAGCGCC
GGAACCTACC GCATCACCGA CGGCCGGGGC GGGGCAGGCC AGGGTCAGCA GCGGTTCGCG
CCGCTCAACA GCTGGCCGGA CAACGCCAAT CTCGACAAGG CACGGCGGCT CTTGTGGCCA
ATCAAGCAGA AATACGGCAA CCGGATCTCC TGGGCGGATC TGTTGATCCT GACCGGCAAT
GTCGCGCTCG AATCCATGGG CTTCAAGACC TTTGGCTTCG CCGGTGGCCG AACCGATGTG
TGGGAGCCCG AGGAACTGTT CTGGGGGCCG GAAGGCACCT GGCTCGGTGA CGAGCGTTAC
AGTGGCGAAC GGCAATTGAG CGAGCCGCTT GCGGCCGTGC AGATGGGCCT CATCTATGTG
AATCCGGAAG GCCCGAACGG CAATCCTGAT CCAGTAGCGG CCGCACATGA CATTCGCGAG
ACCTTCGCCC GCATGGCAAT GAACGACGAG GAGACCGTCG CCCTGATCGC CGGCGGCCAC
ACCTTTGGCA AGACGCATGG CGCCGGCGAT CCGTCCTTCA TCGGAGCGGA CCCGGAAGGC
GGCGCGATCG AGGATCAGGG GCTTGGCTGG AAGAGCACTT TCGGCACAGG CGTCGGCAAG
GACGCGATCA CCGGCGGACC GGAAGTGACC TGGTCGCAGA CGCCGACCCG GTGGAGCAAC
TATTTCTTCG AGAACCTTTT CAACTTCGAA TGGGAGCTGA GCAAGAGCCC GGCTGGTGCG
CATCAGTGGA AAGCCAAGAA CGCCGAGGCC TCCGTTCCGG ATGCCTATGA TGCGACGAGG
AAGCACGTTC CGACCATGCT GACCACCGAC CTGTCGCTCC GCTTCGATCC GGTATACGAG
AAGATTTCGC GCCGCTTCCT CGAAAATCCG GACCAGTTCG CCGACGCCTT CGCCCGCGCG
TGGTTCAAGC TGACCCACCG CGACATGGGG CCAAAGGTTC GCTATCTCGG CCCCGAGGTT
CCGGCCGAGG ACCTGATCTG GCAGGACGTG ATCCCGCCCG TCGACCACGA ACTAGTCGAC
GACGCTGATG TAGCCGGTCT CAAGGCGAAG ATCCTCGCTT CCAGCCTTTC GGTGCAGGAG
CTCGTCTCCA CCGCCTGGGA CTCGGCTTCG ACCTTCCGCG GCTCGGACAA GCGTGGCGGC
GCCAACGGTG CGCGCATCCG TCTCGCGCCG CAGAAAGACT GGGAGGTCAA TCAGCCGGCT
CAGCTCGCCA GAGTTCTCTC GGTGCTTGAA GGGATACAGA GGGACTTCAA CGCTTCCCAG
GCCGGCGGCA AGAAGATCTC ACTTGCCGAC CTGATCGTGC TTGCAGGCAA TGCGGGGGTC
GAGAAGGCGG CGAGGGCGGC CGGACAAGAG ATCATCGTGC CCTTCACGCC GGGCCGCATG
GATGCCTCGG AGGCACAGAC CGACGCGGCC TCTTTCGCCG CGCTGGAGCC TCGTGCCGAC
GGTTTCCGCA ATTATGTAAA CAGCAGCCGC CTGCAATTCA TGAAACCCGA AGAGGCTCTG
GTGGACCGGG CCCAGCTGCT GACGCTGACC GCACCGGAAA TGACCGTTCT CGTCGGCGGT
CTGCGGGTTC TGAAGGCCGG CCAGCCTGAG CACGGCGTAT TCACGTCCCG TCCGGAGGCG
TTGACGAACG ACTTCTTCGT CAACCTGCTG GATATGGGCA CGCAGTGGTC GCCCGTCGAA
GGCAAAGAAG GCGTCTACGA AGGCCGCGAC CGCAAGACGG GGGCAGCCAG ATGGACCGGT
ACCCGCGTCG ACCTGATTTT CGGCTCGCAT TCGCAGCTGC GCGCCTTTGC GGAGGTCTAT
GCCCAAACCG ATGCCAGGGA GAAGTTCGTA AAGGATTTCG TGGCGGCCTG GACCAAGGTC
ATGAACGCCG ATCGGTTTGA TCTGGTGTGA
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| Protein sequence | MTMDQKTDNA GKCPVAHTAP RGRSNRDWWP DQLDVQVLHR HSDLSDPMGK SFNYAEEFRK
LDLDALKRDL HALMTDSQDW WPADFGHYGG LFIRMAWHSA GTYRITDGRG GAGQGQQRFA
PLNSWPDNAN LDKARRLLWP IKQKYGNRIS WADLLILTGN VALESMGFKT FGFAGGRTDV
WEPEELFWGP EGTWLGDERY SGERQLSEPL AAVQMGLIYV NPEGPNGNPD PVAAAHDIRE
TFARMAMNDE ETVALIAGGH TFGKTHGAGD PSFIGADPEG GAIEDQGLGW KSTFGTGVGK
DAITGGPEVT WSQTPTRWSN YFFENLFNFE WELSKSPAGA HQWKAKNAEA SVPDAYDATR
KHVPTMLTTD LSLRFDPVYE KISRRFLENP DQFADAFARA WFKLTHRDMG PKVRYLGPEV
PAEDLIWQDV IPPVDHELVD DADVAGLKAK ILASSLSVQE LVSTAWDSAS TFRGSDKRGG
ANGARIRLAP QKDWEVNQPA QLARVLSVLE GIQRDFNASQ AGGKKISLAD LIVLAGNAGV
EKAARAAGQE IIVPFTPGRM DASEAQTDAA SFAALEPRAD GFRNYVNSSR LQFMKPEEAL
VDRAQLLTLT APEMTVLVGG LRVLKAGQPE HGVFTSRPEA LTNDFFVNLL DMGTQWSPVE
GKEGVYEGRD RKTGAARWTG TRVDLIFGSH SQLRAFAEVY AQTDAREKFV KDFVAAWTKV
MNADRFDLV
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