Gene Smed_5244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5244 
Symbol 
ID5319546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp206912 
End bp207472 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content63% 
IMG OID640777021 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001313953 
Protein GI150377358 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.109908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.421664 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGGA CCGAGGAAGA TCTGGCGATC GAAACGGTCT TGCTGGCGTT TGCAGCGGAT 
CCTATGGCGC GATGGACCTG GCCGCATGCA CACCAGTACC TTGCGGCCAT GCCGCGAATG
ATCCGGGCGT TCGGGAGCAG CGCATTCTCC AACGGGGGCG CCTTCTGCAC CGACGGCTAC
GCCGGGACGG CGCTGTGGCT GTCGCCTGGG GTGCATTCGG ACGAGGAAGG GCTTGGTGCG
GTGCTCGAGA GCACGGTTTC GCGCTCTCTT GCCCCCGAAA CCACGGCCAT ATTCGAGCAG
ATGGCCACGT ACCACCCGAC CGAACCTCAT TGGTACTTGC CCCTTATCGG CGTCGACCCG
GCACATCAAG GCGAAGGTCA CGGCGACGCC TTGATGACGT ACGCACTCGC ACGGTGCGAT
CGCGATCACG CGCCAGCCTA TTTGGAATCC TCAAATCCGC GCAACATTCC GTTCTATCGA
CGCTACGGCT TCGAACCACT CGGCTCGATT CAGGTCGGTT CGTCGCCGAC GCTCGTCCCG
ATGTTGCGGC GTTCGCGTTG A
 
Protein sequence
MAGTEEDLAI ETVLLAFAAD PMARWTWPHA HQYLAAMPRM IRAFGSSAFS NGGAFCTDGY 
AGTALWLSPG VHSDEEGLGA VLESTVSRSL APETTAIFEQ MATYHPTEPH WYLPLIGVDP
AHQGEGHGDA LMTYALARCD RDHAPAYLES SNPRNIPFYR RYGFEPLGSI QVGSSPTLVP
MLRRSR