Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5244 |
Symbol | |
ID | 5319546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 206912 |
End bp | 207472 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640777021 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001313953 |
Protein GI | 150377358 |
COG category | [R] General function prediction only |
COG ID | [COG0456] Acetyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.109908 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.421664 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGGA CCGAGGAAGA TCTGGCGATC GAAACGGTCT TGCTGGCGTT TGCAGCGGAT CCTATGGCGC GATGGACCTG GCCGCATGCA CACCAGTACC TTGCGGCCAT GCCGCGAATG ATCCGGGCGT TCGGGAGCAG CGCATTCTCC AACGGGGGCG CCTTCTGCAC CGACGGCTAC GCCGGGACGG CGCTGTGGCT GTCGCCTGGG GTGCATTCGG ACGAGGAAGG GCTTGGTGCG GTGCTCGAGA GCACGGTTTC GCGCTCTCTT GCCCCCGAAA CCACGGCCAT ATTCGAGCAG ATGGCCACGT ACCACCCGAC CGAACCTCAT TGGTACTTGC CCCTTATCGG CGTCGACCCG GCACATCAAG GCGAAGGTCA CGGCGACGCC TTGATGACGT ACGCACTCGC ACGGTGCGAT CGCGATCACG CGCCAGCCTA TTTGGAATCC TCAAATCCGC GCAACATTCC GTTCTATCGA CGCTACGGCT TCGAACCACT CGGCTCGATT CAGGTCGGTT CGTCGCCGAC GCTCGTCCCG ATGTTGCGGC GTTCGCGTTG A
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Protein sequence | MAGTEEDLAI ETVLLAFAAD PMARWTWPHA HQYLAAMPRM IRAFGSSAFS NGGAFCTDGY AGTALWLSPG VHSDEEGLGA VLESTVSRSL APETTAIFEQ MATYHPTEPH WYLPLIGVDP AHQGEGHGDA LMTYALARCD RDHAPAYLES SNPRNIPFYR RYGFEPLGSI QVGSSPTLVP MLRRSR
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