| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5236 |
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| Symbol | |
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| ID | 5319538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 196826 |
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| End bp | 198037 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640777013 |
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| Product | peptidase M20 |
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| Protein accession | YP_001313945 |
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| Protein GI | 150377350 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2195] Di- and tripeptidases |
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| TIGRFAM ID | [TIGR01883] peptidase T-like protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCATGA TGGACAACTT CGCAATTCCC TTGGATACGG CTGCTGCCGT AGAACACCTC
ATGAGGTTTC TCTCCGTAGA GGGAGTAACG GGCAAGGAGG CGGACATCGC GGCGTCGGTC
ATCGAAGCTC TCAAGGCCGT GGGGGTTTCT GGAGAAAACA TCCGCTTCGA CGACGCCAAC
GAGAGGATCC CTTTACCGAC CGAAACGGGA AACCTGATAG TCGATCTTCC GGGCACCCGA
CCCGGCCCTC GGCTGCTGTT CTCCACGCAT CTCGACACTG TACCCTTGTG TGCAGGAGCA
AAACCACTGC GTGACGGCAA TCGCATAGTG TCGGACGGCA CAACCGCCCT CGGCGGGGAC
GCGCGCACAG GGGTTGCTCT TCTGGTGGTC GTGGCGGAAA CGCTGATCAA GCATAGCCTC
CCGCACCCGC CGATCACCCT TCTTTTTACC GTTCGCGAGG AGAGCGGGCT CCACGGCGCC
CGCGAACTCG ACCCGGCCGT CCTTGGCGGA CCGGTGATGT GCGTCAACGT CGACGGCCAG
CTCGCATCGG ACCTCATCAT TGGAGCAGTG GGGCAGGAGA ACTGGGAGGC AGAAATCGTG
GGACGGGCGT CCCACGCCGG AGTCGCGCCG GAAACGGGGA TATCCGCAAC GCTCGTGGGC
GCCCTCGCCC TGGCTGCGGC CTATGCGGCA GGCTGGTTCG GAAAGATCGA GAAATCCGAC
GATCGCGGCA CAAGCAACAT CGGAATTTTC GGCGGGAAGG ACGGCATGGC AGCCGGCGAC
GCGACGAACG TCGTCACCGA CTACGCTTTC CTGAAAGGCG AGGCCCGCAG TCCGGAACCG
GCCTTCGCAA AGATGATAGC CGAAGGCTAT GAAGCTGCTT TCGAGAAGGC GAAGCAGGCG
GTGAAGGATC GCAACGGAGA GACCGCCCGC GTGACCTTCA TTCACCACAC AGCTTATCCA
CCATTCAAGC TCAACGAGAA TTCGCCGGCT GTGGTTCGCG CAGCCAAGGC GATGAAGTTG
CTCGGACTCG AGCCGAACTA TCTGTTCTCA AATGGAGGTC TCGACGCCAA TTGGCTGGAC
AAGCACGGCG TTCCTACGGT CACGATCGGT GCAGGTCAGG CGGAAATCCA TACCGTGAAC
GAGTATGTTG ACCTTAGGGA GTATGAGAAA GGATGTCGGC TTGGCGTGCT GCTTGCAACG
ATGCCGGAAT AG
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| Protein sequence | MVMMDNFAIP LDTAAAVEHL MRFLSVEGVT GKEADIAASV IEALKAVGVS GENIRFDDAN
ERIPLPTETG NLIVDLPGTR PGPRLLFSTH LDTVPLCAGA KPLRDGNRIV SDGTTALGGD
ARTGVALLVV VAETLIKHSL PHPPITLLFT VREESGLHGA RELDPAVLGG PVMCVNVDGQ
LASDLIIGAV GQENWEAEIV GRASHAGVAP ETGISATLVG ALALAAAYAA GWFGKIEKSD
DRGTSNIGIF GGKDGMAAGD ATNVVTDYAF LKGEARSPEP AFAKMIAEGY EAAFEKAKQA
VKDRNGETAR VTFIHHTAYP PFKLNENSPA VVRAAKAMKL LGLEPNYLFS NGGLDANWLD
KHGVPTVTIG AGQAEIHTVN EYVDLREYEK GCRLGVLLAT MPE
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