| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5102 |
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| Symbol | |
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| ID | 5319404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 49375 |
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| End bp | 50499 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776880 |
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| Product | mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_001313812 |
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| Protein GI | 150377217 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.401813 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAAAA TATCAGGCAT CCGCGTCCGT CCGCTGGTTC TGCCGCTGAA ACAGCCTTAT
CACTGGTCCT ACGGCATTCG CGAATCCTTT GCGGTCAACC TTATCGAGAT CGAGGCGGAT
GACGGCTCGG TCGGGATCGG CGAATGCACG GTGGCGCCCG ATCAGGCCGG TACGGCGGCC
ATTCTTCATC GCCTTGCCGG ACATCTCATC GGCCATTCGC CCCATGATGT GGCGCCGCTC
ATCGCGCGCA TCTTCCACCA GGAATATCTC GGGCACGGCG CCAATATCAT GCGTGCGGCC
AATCAGGTGT TCTCCGGTAT CGACATGGCC ATGTGGGATC TGCAGGGCAA GCTCGCCGGC
TTGCCCGTGC ACCAGCTGCT GGGCGGCGCA CACCGGAAGG CGGTCGGCTA TTTCTACTTC
CTCCAGGGAG AAACCGCCGA AGAGCTTGCG CGGGATGCCG CCGCCGGTCG GGCCCGGGGC
GAGCGGGTCT TCTATCTCAA GGTCGGCCGA GGCGAGAAGA CCGACCTGGA GATCACCGCT
GCGGTTCGCC GCGAGATCGG CGACGCGCGC CTTCGCCTGG ACGCGAACGA AGGCTGGAGC
GTGCATGACG CGATCAACAT GTGCCGCAAG CTGGAAAAAT ACGACATCGA GTTCATCGAG
CAGCCGACGG TCAGCTGGAG TATTCCGGCC ATGGCGCATG TCCGCGAGAA GGTCGGTATT
CCGATCGTCG CGGATCAGGC CGCCTTCACG CTCTACGACG TCTATGAGAT ATGCCGGCAG
CGTGCTGCGG ACATGATCTG CATCGGCCCG CGCGAAATCG GCGGGATACA GCCGATGATG
AAGGCGGCAG CCGTGGCGGA GGCCGCCGGG CTGAAGATCT GCATCCATTC CTCCTTCACG
ACCGGCATCA CCACCTGCGC GGAGCACCAT ATCGGGCTTG CCATTCCCAA TCTCGATGAC
GGTAACCAGA TCATGTGGCA GCTCGTTCAG AAGGATATCG TTTCCTCGCC GGATCTGGCG
CCCAGGAACG GCTGGCTCGA TGCCTTCAAG AAGCCGGGAC TGGGCTTCCA ACTCGCCGAA
GACCTGATCG CCGACGGCGA AAGACGCTTT GCGGCGAGCC GATGA
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| Protein sequence | MVKISGIRVR PLVLPLKQPY HWSYGIRESF AVNLIEIEAD DGSVGIGECT VAPDQAGTAA
ILHRLAGHLI GHSPHDVAPL IARIFHQEYL GHGANIMRAA NQVFSGIDMA MWDLQGKLAG
LPVHQLLGGA HRKAVGYFYF LQGETAEELA RDAAAGRARG ERVFYLKVGR GEKTDLEITA
AVRREIGDAR LRLDANEGWS VHDAINMCRK LEKYDIEFIE QPTVSWSIPA MAHVREKVGI
PIVADQAAFT LYDVYEICRQ RAADMICIGP REIGGIQPMM KAAAVAEAAG LKICIHSSFT
TGITTCAEHH IGLAIPNLDD GNQIMWQLVQ KDIVSSPDLA PRNGWLDAFK KPGLGFQLAE
DLIADGERRF AASR
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