| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5086 |
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| Symbol | |
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| ID | 5319388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 34690 |
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| End bp | 36327 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640776865 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_001313797 |
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| Protein GI | 150377202 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGGGG GCGCGCTTGC CGCCACTCTG AAAAGCAGGC CGGAGGAGAA GCAGACCTAC
GAAACGGAAT CCGGCATTCC GCTGAAGCGT ATCTATACTG CTGCCGACAT CGCCGATATC
CCCGCAAGCG AGCTTGGATT TCCCGGTGCC TATCCCTTCA CGCGGGGCGT GTACCCGACC
ATGTATCGCG GCCGGCCCTG GACCATCCGG CAGGTCGCCG GCTTCGGCAA TCCCGAAGCG
ACGAACCAAC GATACAAATA TATGATCCAG ACGGGCCAGA CCGGCCTTTC GACGGACTTC
GATCTTCCGA CCTTGCTGGG GCTCGATTCC GACGATCCGA TGGCCTTCGG TGAGGTCGGG
CGCGTCGGCG TCGCCATCGA TACGGTAGAC GACGTCGAAC GGCTTTTCGA CGGAATAGAT
CTCGAGAAGA TTTCGGTTTC CCTCACGATC AACCCCTCCG CCTGGGTCAT CTACGCCATG
TTCGTCACGG TGGCGGAAGA ACGTGGCTGC GATCTGCACA AGCTGACCGG CACGTTGCAG
GCCGATCCGC TGAAGGAATA TGTCGCCCAG AAGGAGTGGA TCTATCCGGT CCGGCCGGCC
GTCCGGCTGC TGCGCGATCT GATCATGTAC AGCGCCAGGA CGACGCCGAA GATCAATCCG
GTCAGTCTGA GCGGATATCA CCTCTCCGAT GTCGGCGGGA ATGCGCTTCA GGAAATCGCC
TTCACCATGG CCTTCACGAT TTCCTACTGT GAAGAGGTGA CCAGAGCCGG CATGGACATC
GACGATTTCG CGCCGCGCCT GTCGTTCTTC TTCATCAGCC ATCAGGACTT CTTCGAACAG
ATCTGCAAGT TCCGGGCGGC GCGGCGCGTC TATGCCAAGA TCATGTCGGA GCGCTTTAAC
GCCCGAAAGC CGGAATCCAT GCGTCTGCGC GTGCATGTGC AGACGGCCGC CATGAGCCTG
ACCAAGGTCG AGCATCACAA CAATCTCATG CGCACCGCCA TCCAGGCGCT GGGCGCCGTG
CTCGGGGGAT GCCAGAGCAT GCACACCAAC GGCCTTGACG AAGCTTTCGC CATTCCCACC
GAAGAGGCGA TGAAACTCGC CATCCGAACC CAGCAGATCA TCCGCGAAGA AATCAACGTC
ACGTCGGTGA TCGATCCTCT CGGCGGCTCC TATTTCATCG AGCGGCTGAC GAAGGACATG
GAAGACGAGG TCTGGAAGAT GCTCGACGAA ATCCAGAAGC GCGGCGGCGC GATCAAGCTG
GTCGAGGAGG GCTGGTTCCA GCAGAAACTC GCGGATTCCG CTTACGCCAC CTTCAAGAAG
ATCGGTTCCG GCGAGAAGAT CTCGGTCGGG GTCAACAAAT ATGTCGATGC CGCCAGCCGG
TCGGCGGATG TGCACATTCA TCCCTATGAC GATCATTGCA CGCAGCTGCA GATCGACCGA
CTGCGCGCCG TCAGGGAGAA TCGGGACGAT GCGCGCATTC AGTCCCTTCT GAAGGAACTC
GTCGAGCAGG CCCGGTCGGA CGACATCAAT CTTTTGCCGA AGACCATCGA ACTCGTGAGG
GCCAAGGCAA CGCTCGGCGA GATTTGCAGC GCCCTGCGCG AAGTCTGGGG TTCCTATTCC
GAGCCGATGA TCGTGTGA
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| Protein sequence | MGGGALAATL KSRPEEKQTY ETESGIPLKR IYTAADIADI PASELGFPGA YPFTRGVYPT
MYRGRPWTIR QVAGFGNPEA TNQRYKYMIQ TGQTGLSTDF DLPTLLGLDS DDPMAFGEVG
RVGVAIDTVD DVERLFDGID LEKISVSLTI NPSAWVIYAM FVTVAEERGC DLHKLTGTLQ
ADPLKEYVAQ KEWIYPVRPA VRLLRDLIMY SARTTPKINP VSLSGYHLSD VGGNALQEIA
FTMAFTISYC EEVTRAGMDI DDFAPRLSFF FISHQDFFEQ ICKFRAARRV YAKIMSERFN
ARKPESMRLR VHVQTAAMSL TKVEHHNNLM RTAIQALGAV LGGCQSMHTN GLDEAFAIPT
EEAMKLAIRT QQIIREEINV TSVIDPLGGS YFIERLTKDM EDEVWKMLDE IQKRGGAIKL
VEEGWFQQKL ADSAYATFKK IGSGEKISVG VNKYVDAASR SADVHIHPYD DHCTQLQIDR
LRAVRENRDD ARIQSLLKEL VEQARSDDIN LLPKTIELVR AKATLGEICS ALREVWGSYS
EPMIV
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