| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5040 |
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| Symbol | |
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| ID | 5319089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1560111 |
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| End bp | 1561784 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776821 |
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| Product | ABC transporter related |
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| Protein accession | YP_001313753 |
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| Protein GI | 150377157 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTGG AACACGTGAC GACACCCCTG CTGCGGGTGC AGAACCTTGG CCTTCGCCAT
GTCTCGGGCT CGGCCACAAC ACCAATCCTG TCCGACGTGA GTTTCGAACT CGGGCGAGGC
GAGATCCTCG GCATCATCGG CGAGTCCGGC GCCGGCAAAT CGACCGTCGG CAATGCCATC
CTCGGGCTGC TTTCGCCCGA GTTCCAGCAA ACCTCCGGAA CAATCGAGTT CGATGGCAAG
GCGATCGACG GCATGACTGC CGACGAGCGC CAGACGCTTC GAGGACGGCG GATATCGGCG
ATCTTCCAGG ACCACACCGC CTCGCTCGAT CCGCTGATGA GCGTCGGCGC CCAAGTCGAA
GAAACCTGCC TTACGCTCGA CAGCTCGCTT TCCAAGCGCG AGGCGCGTGC TCGCGCGATT
GATTTGCTTG CCCGTGTCGG CATTCCCGAA CCGGAGCGGC GATACCGCAA TTACCCGCAC
CAGTTCTCCG GCGGGCAGAG GCAACGCGTC GTCATCGCCA TTGCGCTTGC CGGCTCTCCC
GACATCATCA TCGCCGACGA GCCGACGTCG GCGCTCGATG CGACGGTTCA GAAGCAGGTT
CTGGAACTTC TAAAGATACT TGTCGACGAA ACCGGTGTCT CGATCATCCT CGTCACCCAC
GACATGGGCG TGATCTCCGA AATCACCAAC CGGGTTCTCG TCATGCGAAA GGGCCAGGTG
GTCGAAGCGG ACCGCACAGC CACCATTCTC GATCAGCCCC GCCACGACTA TACGAAGAAG
CTGCTTGCCG CCGTCCCAAG GCTTCGCATC CCGACACGCA CTGTCAAGGC GGAAGATGAT
GGCGGCCAAG CAGGCTCTTC CGCCATAGAC GGCGACCAGA ACCCGCTTCT GGTCGCGGAA
GGCCTTTCGA AACAGTTCGC GCCGCAGGGT TTTGCTTGGG GCATCGGCCG GGGCAAGCCG
AGATTCGGCC TGCGCGACGT CGGCATCCGG CTGCCGCGCG GGTCGATCAC CGGGATCGTC
GGCGAGAGCG GCAGTGGAAA GACGACCTTC GGCCGCATCC TCGCGGGCCT CGATACGGCA
CCGACCGGCA GGATCACGAT CGGGGAACAC GCCTTCAACG TTTCGCGAAG TGGCCGCCGC
AGCGGTCTTC TCGGCCGCGT CCAGATGATC TTCCAGGATC CATCCGTCTC CCTCAACCCC
CGCATGACCA TCGGCGAGAC GCTCGATGAA AGCATCCGCT TCGGCGGGAG GACCGGCTCC
AGCAAAGAGC CGGCGGACCT GGCCGCAATG ATGGATCGGC TTGGTCTGCC GCGAAGCCTG
CTCGCCCGCC ATCCGCATCA GCTCTCCGGT GGCCAAAAGC AGCGTGTCTG TATCGCTCGC
GCCCTGTTGG CACGGCCTGA GATCATCGTC GCGGACGAGC CGACGTCCGC GCTCGACGTC
TCGGTTCAGG CCGAGATCGT CGGTCTCCTG AAGGACACGA TCGCGGAGCG GGCGATGACA
ATGGTCTTCA TCTCCCATGA CCTCGCGATC GTTCAAGCGA TGTGCAGCTC CGTCTTCATC
TTCAAGGACG GCCGGATCGA GGATTTCGGG CCCACCGAGT TCATCTTCTC GCGATCCGAC
AATCCCTACA CCCGCGCCCT CATCAACGCC CGACCCCAGC GGTTCACATG CTGA
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| Protein sequence | MTVEHVTTPL LRVQNLGLRH VSGSATTPIL SDVSFELGRG EILGIIGESG AGKSTVGNAI
LGLLSPEFQQ TSGTIEFDGK AIDGMTADER QTLRGRRISA IFQDHTASLD PLMSVGAQVE
ETCLTLDSSL SKREARARAI DLLARVGIPE PERRYRNYPH QFSGGQRQRV VIAIALAGSP
DIIIADEPTS ALDATVQKQV LELLKILVDE TGVSIILVTH DMGVISEITN RVLVMRKGQV
VEADRTATIL DQPRHDYTKK LLAAVPRLRI PTRTVKAEDD GGQAGSSAID GDQNPLLVAE
GLSKQFAPQG FAWGIGRGKP RFGLRDVGIR LPRGSITGIV GESGSGKTTF GRILAGLDTA
PTGRITIGEH AFNVSRSGRR SGLLGRVQMI FQDPSVSLNP RMTIGETLDE SIRFGGRTGS
SKEPADLAAM MDRLGLPRSL LARHPHQLSG GQKQRVCIAR ALLARPEIIV ADEPTSALDV
SVQAEIVGLL KDTIAERAMT MVFISHDLAI VQAMCSSVFI FKDGRIEDFG PTEFIFSRSD
NPYTRALINA RPQRFTC
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