Gene Smed_5010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5010 
Symbol 
ID5318659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1530138 
End bp1530878 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content54% 
IMG OID640776792 
Producthypothetical protein 
Protein accessionYP_001313724 
Protein GI150377128 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0268144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTATAT CCCATCGCCA TAAGTTCATT TTCATCCACG TACCGAAAAC CGCCGGCAGC 
ACGGTTTCTG CCTATCTTGC TCGCGAATTC GGACCATGGG ATCTGCAACT TGGGTCCTGG
AAGGATGCAC TCGGGAATGG AGCCAAAGCC AATCGGCTGG CGCTGATTGC TATGTTCTGT
CACCTGTCTC CACTTAAGAT CGCTCAAACC CTCATCCGCA ACCACAGTGT CGATTCCTTG
GCCGGTCTCG CTCTCAGCCG GCGTTTTGCA GGCAGGCTCG CGGATCATTC GAGCGCAAGC
GAAATCGAAG CCTTCGATCC CTCTGCCTGG AAACATTATT TCAAATTTTG CTTCGTGCGA
AACCCGTTCG AGAGGGCTGT TTCTCTTTAC AATTGGCACT ACAGGAAGGC CGATACCCGG
CCGAGCTTCT CGCAAATGCT CTGCCTGATC GAAGCAGGTG CAGCCGAGAA GGAGCGTATT
AATTGGAAGT CGTGGCAGCT CTACACCAAG AACGACGAAG TTGTTGTTGA TTTCGTAGGT
CGGCAGGAGC GCCTCTCGGA AGATCTACGC CACGTATGCG ACAGGCTCGG GCTGCCTTTT
GATGAACGAT TCCTGACCAG AGCGAAGGCG AACCCAAGGA GGCCGGATAT TCGCAGTTAT
TATAAACCCG GCGACCGGGA ACGCGTCGAA CGGCTATTCG GCGCCGAGAT CGAACACTTC
AAGTATCGTT TCCCCGATTA G
 
Protein sequence
MIISHRHKFI FIHVPKTAGS TVSAYLAREF GPWDLQLGSW KDALGNGAKA NRLALIAMFC 
HLSPLKIAQT LIRNHSVDSL AGLALSRRFA GRLADHSSAS EIEAFDPSAW KHYFKFCFVR
NPFERAVSLY NWHYRKADTR PSFSQMLCLI EAGAAEKERI NWKSWQLYTK NDEVVVDFVG
RQERLSEDLR HVCDRLGLPF DERFLTRAKA NPRRPDIRSY YKPGDRERVE RLFGAEIEHF
KYRFPD