Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5007 |
Symbol | |
ID | 5318656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 1524637 |
End bp | 1525728 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640776789 |
Product | fatty acid desaturase |
Protein accession | YP_001313721 |
Protein GI | 150377125 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3239] Fatty acid desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.427565 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0159789 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACAG TTCCGACCAA GCGCGACTAC AGCCTGCTCG GCCGCGATGC CGAGGCAGCC GTTGCAAGCG GCCTCGCCGC GGCCGAGTGG TACCACACGG AAATTCCCCG CAAGCAGATG AAAGAGCTGA TGAAGCGCGA GGATGGACCC GCCATCCGCG ATACCGCGAT CTGGCTCGGA AGTCTCGTCC TTCTCGGCGG TTTCGGCATC TATTTCTGGG GCAGCCTGTG GGCGGTGCCG TTCTTCCTGG CCTATGGCGT GCTTTACGGC TCCGCTTCCG ACAGCCGCTG GCATGAATGC GGCCATGGCA CGGCTTTCAA GACGATGTGG ATGAACGACG TCGTCTACCA GATCGCCTGC TTCATGATCA TGCGCAATCC CGTGACCTGG CGCTGGAGCC ACACGCGCCA TCACACCGAT ACCGTGATCG TCGGCCGTGA CCCTGAGATC GCGGTCATGC GGCCGCCGGA TCTGCTGCGC CTCGTGCTCA ACATCTTCGG CATCATCGAT GTCTGGCATG CCGTGGTCGA CATGGTCAGA AACGCCTTCG GCGTGATCAG CGCCGCTGAA AAGACTTTCA TTCCGGAAAC GGAGCAGCCG AAGGCGATCC GCGTCGCCCG CATCTGGCTT GCCATCTATC TGGCGACGAT CGGGCTCTCG CTCTATCTCG GCTCAATCCT GCCGCTGGTG CTTATCGGCC TGCCGCGGCT CTACGGCGCG TGGCACCATA TAATGACCGG CCTCCTGCAG CATGGCGGGC TTGCCGACAA CGTGACCGAC CACCGTCTGA ACAGCCGCAC CGTCTATATG AACCCGGTCA GCCGCTTCGT TTACTGGAAC ATGAACTACC ATGTGGAGCA TCACATGTTC CCGATGGTGC CCTACCACGC GCTGCCGAGG CTGCACGCCA TGATCAGGCA CGACCTGCCG GCGGCGAACC CTTCGATCCT TCACGGCTAC CGTGAGATGA TCCCGGCATT CCTCCGGCAG CTGCGCAACG AGGATTATTT CCTGAAACGC GAATTGCCGC CGACGGCGAG GCCCTATCGC GAAGAGCTGC ACAACGACCG GCTCGTTTCT GCCGCCGAGT AA
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Protein sequence | MTTVPTKRDY SLLGRDAEAA VASGLAAAEW YHTEIPRKQM KELMKREDGP AIRDTAIWLG SLVLLGGFGI YFWGSLWAVP FFLAYGVLYG SASDSRWHEC GHGTAFKTMW MNDVVYQIAC FMIMRNPVTW RWSHTRHHTD TVIVGRDPEI AVMRPPDLLR LVLNIFGIID VWHAVVDMVR NAFGVISAAE KTFIPETEQP KAIRVARIWL AIYLATIGLS LYLGSILPLV LIGLPRLYGA WHHIMTGLLQ HGGLADNVTD HRLNSRTVYM NPVSRFVYWN MNYHVEHHMF PMVPYHALPR LHAMIRHDLP AANPSILHGY REMIPAFLRQ LRNEDYFLKR ELPPTARPYR EELHNDRLVS AAE
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