| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4990 |
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| Symbol | |
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| ID | 5318711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1503718 |
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| End bp | 1504719 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776772 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001313704 |
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| Protein GI | 150377108 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.427565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00324105 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTCATT TTTCAGTTGT TTCAGCGATC GTCATATTTG GTCTGGTACT GTCGGGCTGC
GGCTTCGGGG GTGATCGTCC CTCGCGGGAG ACGACGAGCT CCGTGCGTCC GGCAAGTCCG
GTTCCGTCAG CGGAAGTCAG CGCCGTTGCC GCGAAAAGCG CGCCGGAGGC GCTCGCCTGG
GCGGGGCCGG TGCCGGAGCC CCAGGCTTTT ACGTCCGCGC AGAGGACCGT CGGCATGCCC
GTGCCCGCCG AGCGTCCGCT TGCGATGCTC GCTCCGGAAA ATCCCGCGGG GCCTCGGGGC
GGCCGCACAC GCGTTTACAG CCACAGCTTC CGTGATGCCC ATCCGATCAA CTTCGGCAAG
AGATCACCGC GCAAAATGGC CGTTCATGGC GTCGACGTTT CGCGTTGGCA GGGAGACATA
AACTGGGCGA AGCTGCGCAG CCAGGGCGCC AACTTCGCCT ATATCAAGGC GACCGATGGC
GGCGATCATC TCGATCCCAT GTTCAAGAAG AACTGGCGCC GGGCGAACGA AGCCGGACTG
AAACGCGGCG CCTATCACTT CTTCTACTGG TGCCGCACGG CCGGCGAGCA GGCTGACTGG
TTCATTCGCA ACGTGCCGCG GGATCCGACC GCGCTTCCCC CCGTGATCGA TGTCGAATGG
AACGGTGAGT CGAGCTGCAA ACGGCGCCCC TCGCGCGAGC GGGTGCTCGA AAAGATGCAG
GTCTTCATGG ACAAGCTGGA GCGGCATTAC GGCCAGCGCC CGATCATCTA CACCGCGCCT
GACTTCTACC GCGACAATCT GCAGGGCGCG TTTCCCAATC ATCCCTTCTG GCTGCGCTCG
GTCGCGGCCC ATCCGTCCAA GGTTTATCCC GGACGCAAAT GGGTGTTCTG GCAATATTCG
GGTTCGGGTC TGTCCCACGG CGTCGAGGGG CGGATCGATC TCAACGTCTT CAACGGCAGC
GAGGAGGATT GGCACAATTG GGTGGCGGCG CGCTCGAGTT GA
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| Protein sequence | MRHFSVVSAI VIFGLVLSGC GFGGDRPSRE TTSSVRPASP VPSAEVSAVA AKSAPEALAW
AGPVPEPQAF TSAQRTVGMP VPAERPLAML APENPAGPRG GRTRVYSHSF RDAHPINFGK
RSPRKMAVHG VDVSRWQGDI NWAKLRSQGA NFAYIKATDG GDHLDPMFKK NWRRANEAGL
KRGAYHFFYW CRTAGEQADW FIRNVPRDPT ALPPVIDVEW NGESSCKRRP SRERVLEKMQ
VFMDKLERHY GQRPIIYTAP DFYRDNLQGA FPNHPFWLRS VAAHPSKVYP GRKWVFWQYS
GSGLSHGVEG RIDLNVFNGS EEDWHNWVAA RSS
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