Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4981 |
Symbol | |
ID | 5318794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 1494610 |
End bp | 1495446 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640776763 |
Product | amidohydrolase 2 |
Protein accession | YP_001313695 |
Protein GI | 150377099 |
COG category | [R] General function prediction only |
COG ID | [COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0402782 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0307592 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCATCG ACACGCACCT GCATCTGATC GACAAATCCG CGTTGAGCTA TCCCTGGCTT GGCGGCGTCC CCGCACTCGA TCGCGATTTT CTCTATTCGG CCTATGCGGC AGAAGCAAAG CGTGTCGGCA TTGCCGCTTC GCTGCACATG GAAGTCGACG TCGAGGCGGG TCAGATCGAA CGCGAAACGA GCGAGATTGC GCGTCTGTCG CGTGAGCCGG GAAGCCTTCT GAGGGGCGCG ATCGCCGCCT GCCGGCCAGA AGACGACGGC TTTGCCGCCT ATCTCGAGCG CCAGGAAGCG AACGCCTTCG TCCGGGGATT CAGGCGGGTG CTGCACGTCG TTGCCGACGA TCTTTCGGAA CAGCCTCTTT TCCGCGAAAA CATCAGGCGC CTTTCAGCGA CGCGCTTCAC CTTCGATCTG TGCGTGCTGC CGCACCAGAT CCCGAAAGCG ACGGCTCTTG CCGACCTCGC GCCGGAAGTC CGTTTCGTTC TCGATCATTG CGGCGTCCCG GACATCAAGG GCCGGGCGGA GCACCCCTGG CGCGAGCATA TGACCGAAAT CGCCCGCCGG CCGAATGTGA CTGCGAAGAT TTCCGGGGTG ATCGCCTATG CCGAGGAAGA TTGGACGCTT GCCTCGATCC GCCCCTATGT CGAGCACACG ATCGCCGCTT TCGGCTGGGA CCGTATTGTC TGGGGCAGTG ACTGGCCGGT CTGCACGCTT GGCGGCAACC TGTCGACCTG GGTTGCGGCG ACCCATGCCC TCATCGAAGG CTGCAGCCTC GATGAGCGGA CGAAGCTGCT TTCGGGCAAT GCACGCCGGA TATGGAATCT AGGCTGA
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Protein sequence | MIIDTHLHLI DKSALSYPWL GGVPALDRDF LYSAYAAEAK RVGIAASLHM EVDVEAGQIE RETSEIARLS REPGSLLRGA IAACRPEDDG FAAYLERQEA NAFVRGFRRV LHVVADDLSE QPLFRENIRR LSATRFTFDL CVLPHQIPKA TALADLAPEV RFVLDHCGVP DIKGRAEHPW REHMTEIARR PNVTAKISGV IAYAEEDWTL ASIRPYVEHT IAAFGWDRIV WGSDWPVCTL GGNLSTWVAA THALIEGCSL DERTKLLSGN ARRIWNLG
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