| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4917 |
|---|
| Symbol | |
|---|
| ID | 5319129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 1427677 |
|---|
| End bp | 1428579 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640776701 |
|---|
| Product | xylose isomerase domain-containing protein |
|---|
| Protein accession | YP_001313633 |
|---|
| Protein GI | 150377037 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.460594 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.462134 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATC CAGCCAAATC CATCCGTATC GGGACCATGG TCAGCGCCAC CAAGGGCGAG
GCCGCGAAGC GCATCGGCGA GATCGCCGAT CTGGGCTTTG AAAGCTTCGA GCCGTTCTTT
TGGCAGACCA CCAACGGACA GGATCTTGCC GAACTCGGCA AGCGCTGCCG CGACGCGATC
GGCGACCGCG ACATCACGAT CTCGACGCTC GGGATGTTCG GCAATCCGCT GGAGGAAACC
GACATCGATC TGCAGACGCT GCAAGGCTGG AAGGATTGCA TCGACAACGC CCATCATTTC
GGCGCGACAT GCGTCGCCGG CTTCACCGGA CGCATCCGTA ACCGGCCATT GACCGACAGC
CTGCCGCGCT ACCGCAAGGT CTGGAGCGAG CTCGCTCAGC GCGCCGCGGA CAAGGGCGTG
AAGATCGCTT TCGAGAATTG CGCCATGGAT GGCAACTGGG CAACGGGCGA CTGGAATATC
GCCCACAATC CGGATGCCTG GGAGCTGATC TTCAACGAAA CGCCCGACGA CAACATCGGC
ATCGAGTGGG AGCCTTGCCA CCAGATGGTC TATCTGATCG ACCCGCTGCC GCAAATCCGT
AAATGGGCGC ACAAGATCTT TCATGTGCAC GGCAAGGACG CGACGATCCG CTGGGACGTC
ATTCGCGAGC ACGGCATCTT CGGCAAAGAA AAATTCGTCT TCATGCGCAC ACCCGGCTTC
GGCGACAGCA ACTGGACCGA CATCATCTCC GAGCTTCGGC TCGCGGGCTG GTCCGGATCC
ATCGACATCG AAGGATGGCA CGATCCGGTC TATCGCGATG CACTGGAGAT GACGGGGCAG
GTGCATGCTC TGAATTACCT GAAAGGCAGC CGCGGCGGCG ACTTCGTGGC CGACCGGGCC
TGA
|
|---|
| Protein sequence | MSNPAKSIRI GTMVSATKGE AAKRIGEIAD LGFESFEPFF WQTTNGQDLA ELGKRCRDAI
GDRDITISTL GMFGNPLEET DIDLQTLQGW KDCIDNAHHF GATCVAGFTG RIRNRPLTDS
LPRYRKVWSE LAQRAADKGV KIAFENCAMD GNWATGDWNI AHNPDAWELI FNETPDDNIG
IEWEPCHQMV YLIDPLPQIR KWAHKIFHVH GKDATIRWDV IREHGIFGKE KFVFMRTPGF
GDSNWTDIIS ELRLAGWSGS IDIEGWHDPV YRDALEMTGQ VHALNYLKGS RGGDFVADRA
|
|---|
| |