| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4866 |
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| Symbol | |
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| ID | 5318851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1367370 |
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| End bp | 1368707 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640776651 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001313583 |
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| Protein GI | 150376987 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.778964 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAATA CCGCTGGGAG CACCAGGGAA AGTGAAGTGA GGCGTGTCGT TTTCGCGTCT
CTGATAGGCG CAACGATCGA ATGGTATGAC TTCTTCTTGT ACGGCGTGAT TGCCGGCATC
GTTTTCAATC AGCTGTATTT CCCGTCGCAC GACCCGCTCG TTTCGATGGT GCTGGCCTAT
GCGACCTTTG CCGTAGGTTT CGTCGCCCGT CCGCTCGGCG GCATCGTATT CGGACATTTC
GGCGACAAAC TCGGCCGCAA GCAGATGCTC GTACTCACCA TTCTGATCAT GGGGGTGGCG
ACCGTGCTGA TCGGCGTTCT GCCCACCTAC GAGCAGATTG GTGTGGCAGC CCCCATACTG
CTGCTCATCC TGCGTATCGC ACAAGGCATC GGCATTGGCG GCGAATGGGG CGGCGCAGTC
CTCATGGCCT ACGAATTCGC ACCTGAAGAC AAGCGCGGCT ACTATGCATC GATCCCGCAG
ATCGGCCTTG CGATCGGATT GTGCCTGTCG TCCGGCGTGG TGGCGCTCCT CAGTCTTCTC
CCCGAAGCAG CCTTCATGTC CTGGGGCTGG CGCACTGCTT TCATCGGCTC GGTCGTCCTT
ATCGTCGTCG GCCTTTACAT CCGGCTGAAG GTTGCCGAAA CACCGGATTT CGCCAGCGTC
AAGGAAGAGC GACAGGAGCT CAAGATCCCG TTCGTGGAGC TCATCCGCAC CTATCCTCGC
AATATACTGC TCGGCATGGG TGCCCGCTAT ATCGATGGAG TTTTCTTCAA CGTATTCGCC
GTCTTCTCGA TCGTCTATCT TTCCAAGCAT GTGCAGGTGG ACCGCACGAC GGCATTGTGG
CTCGTATGCC TCTCTGCACT CGTCATGGTC GTGACAATTC CGCTGTTCGG CAAGTTGTCC
GATCGATGGG GGCGTCCGAA AACCTACGCC ATAGGCAGTC TTCTGCTGGC GCTGGTCACC
TTCCCGGCCT TCATGCTCAT GGGAAGCGGG AGCCTGCCGT TGATCGCACT CGCTCTGATC
GTGCCGTTCG GCATCATCTA CGCAATGTGC TACGGCCCCG AAGCGGCACT GTTCTCCGAC
CTTTTCGACG TTAAGGTCCG CTATACCGGC ATTTCCTTCG TCTATCAGTT CTCCGGCATC
TTCGCCAGCG GCATCACGCC AATCATCGCG ACCTTCCTTA TCAGCTATGG CGACGGCTCG
CCCTGGCTGC TGGCCGCCTA CGTGGTGTTT GCGGCTCTTG TTTCGATGGT TTCGGCGATG
CTCATACGTC CGGTTTCGCA AATGCGTACC ACCCTGCCGC ATAAGCCGTT GCGCCCATCA
CCCGTTCACA CAAGCTAA
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| Protein sequence | MLNTAGSTRE SEVRRVVFAS LIGATIEWYD FFLYGVIAGI VFNQLYFPSH DPLVSMVLAY
ATFAVGFVAR PLGGIVFGHF GDKLGRKQML VLTILIMGVA TVLIGVLPTY EQIGVAAPIL
LLILRIAQGI GIGGEWGGAV LMAYEFAPED KRGYYASIPQ IGLAIGLCLS SGVVALLSLL
PEAAFMSWGW RTAFIGSVVL IVVGLYIRLK VAETPDFASV KEERQELKIP FVELIRTYPR
NILLGMGARY IDGVFFNVFA VFSIVYLSKH VQVDRTTALW LVCLSALVMV VTIPLFGKLS
DRWGRPKTYA IGSLLLALVT FPAFMLMGSG SLPLIALALI VPFGIIYAMC YGPEAALFSD
LFDVKVRYTG ISFVYQFSGI FASGITPIIA TFLISYGDGS PWLLAAYVVF AALVSMVSAM
LIRPVSQMRT TLPHKPLRPS PVHTS
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