Gene Smed_4757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4757 
Symbol 
ID5319156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1278318 
End bp1278767 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content61% 
IMG OID640776555 
Producthypothetical protein 
Protein accessionYP_001313487 
Protein GI150376891 
COG category[S] Function unknown 
COG ID[COG4244] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.13862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0394716 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTA CTTCCGCATC GACTGCCATG ACCGTGACAA CCCCTGTCCA TTCGTTGCTC 
GTGCCGTTTC CAGCCGTCTG TTTCACGCTC GCCCTTCTGA CCGACATCGC CTTCTGGCAG
ACGGGGCACA TCATGTGGCA GAACTTTTCC GCATGGCTGC TCTTTGCCGG GATCGCTTTC
GGCGTGATAT CCGGCCTCGT CGGGATCGTG GAGTTTCTGC TTCGCTCGGA CCGTCGCGCA
CGGGGGTCGG TTTGGCTTCA TGTCGTCGGC TACGTGCTCG TGCTCGGCCT GGCCTTCGTC
AACAACCTCG TCCATGCCGG CGATGGCTGG ACGGCTGTCG TGCCTTACGG TTTGATCCTT
TCCGCAGCGA CAGTGCTTCT GACGATCCTT GTCGCCCTGC TTGGCCGGGC CGTGCTCCAT
CGCACGCAAA CTCGGAGTGA GCGATCATGA
 
Protein sequence
MSLTSASTAM TVTTPVHSLL VPFPAVCFTL ALLTDIAFWQ TGHIMWQNFS AWLLFAGIAF 
GVISGLVGIV EFLLRSDRRA RGSVWLHVVG YVLVLGLAFV NNLVHAGDGW TAVVPYGLIL
SAATVLLTIL VALLGRAVLH RTQTRSERS