Gene Smed_4714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4714 
Symbol 
ID5318894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1234615 
End bp1235175 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content61% 
IMG OID640776512 
ProductMarR family transcriptional regulator 
Protein accessionYP_001313444 
Protein GI150376848 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0174586 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTATC CGTTCGCAGA CTTCGGAGAC ACTGTTTCAG TCCTTCCCGC GAATGAAACA 
ATGCGGAAAG GCCTCGAGAC CCTAGCAGCC GACCAGGACG GGGATAATTC GCTCGTTACC
TATTTTGAGC TTGCCAGGGT GATGGAGCGC GCAAGCCGCA GGTTTTCCGG CCTCTTGCGG
GCGGAGTTGA CAAAGCTCGG GGTCGACGAC ATCGGCCCGG CGCAGGCGAT GGTTCTTCTT
GCCATCGGCG ACGCGGAGCT TTCGGTGGGA GAGCTTTTGG ACCGAGGCCA CTATGTGGGT
TCGAACATTT CCTATTACCT GAAACAGCTT GCCGATGGCG ACTACATCGA TCGAATCGCA
TCGCAGCGTG ACAAGCGGTC GGCCCGCATA CGGCTGTCGG TGAAAGGCAG GCAGGTCTGC
GCTGGCCTGC GGGAGGCAGC GAAGGGCTAC GAACGCGCCC TCAGCCACGG AGAGCAGGAC
CGGCGGAATC TCGAGACCGC CTTCCAGACC CTGCACCGCC TCGAACTGGT CTGGGGCAAT
GCCGCGCGTT ACGGGATCTG A
 
Protein sequence
MLYPFADFGD TVSVLPANET MRKGLETLAA DQDGDNSLVT YFELARVMER ASRRFSGLLR 
AELTKLGVDD IGPAQAMVLL AIGDAELSVG ELLDRGHYVG SNISYYLKQL ADGDYIDRIA
SQRDKRSARI RLSVKGRQVC AGLREAAKGY ERALSHGEQD RRNLETAFQT LHRLELVWGN
AARYGI