Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4708 |
Symbol | |
ID | 5318858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 1225798 |
End bp | 1227054 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640776506 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001313438 |
Protein GI | 150376842 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.514087 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGTCC TCGTCGCGGC TCACAACCAT CCGGCCCTTC ACCCGGGAGG CACGGAAATT TTCGCCCACG ACCTGTTCCG CGCCTATAAG CGCGCGGGCT GCGAATCGCT CTTCCTGGGC GCCACCAACC AGATCCACCG ACAGGCACGC CCGGGCACCA GCTTTCAAGG GATCGGCCCG GCAGGAGACG AACTGCTGCT GTGGTCTGGC CACTTCGACC GATTTTTCAT GAGCCAGATC GATCTCTACG GCGTCGTTCC CGACCTGGCG GAACTGCTGC GCGACTTCCG GCCGGACGTC GTCCACATTC ACCACCTGCT GCTGCTCGGC GCGGAGTTTC CACATATCGT GCGCCGTACG CTGCCTGAGT GCCGGATCGT CATGACGCTG CATGACTATT ATCCCATCTG TCATCACGAC GGCTTGATGG TGAGGACGAG CGGCAAAGAG CTTTGCCACG GAGCGAGCCC CGACAGATGC CATGCCTGCT TCAAGGACAT AGCACTCGAC CGGTTCGCGC TGCGCGAACG CCACCTGAAG GCGCTGTTGA GCGACGTCGA CCGGTTCGTG TCGCCGAGCA ATTTCCTTAA AACGCGCTTC GTCGAATGGG GGTTATCGGA AGACGCAATC AGCGTCATTC CGAACGGATT GCCGCCGCGC AAGGAACCGG CGGCAGTTCG TCGGATCGGC TCGGATCGTC CGATCTTCGG CTACTTCGGC AATCTCAATC CGTGGAAGGG CGTCGCTGTA CTGCTCGAAG CGGCGCGGCA GCTCATCGCA GAGGGGCTGG AGTTCGAGCT GCGCGTTCAT GGCGGCGCCC CCTTCCAAAG CGAGAGCTTC GTCGAAGAGA TCACGCGCCT GTTCCAGGAG ACGGCACCAA CCGTACAGCA GCGGGGGCCC TATCGGCGCG AGGACGTGAT CGACCTCGTC GCCTCGGTGG ATTGCACGAT CGTGCCCTCG ATCTGGTGGG AGAATGCGCC ATTGGTCATC CAGGAGGCGC AGGCTCTCGG GCGGCCGGTC ATAGCCAGCA ACATCGGCGG CATGGCCGAG TTGATCGAGG ATGGGTCAAA CGGGCTCACC GTCGCGCCCA ACGATCCGCG GGCGCTGGCC TCTGCCATGC GCCGTCTTGC ACAGGACGGC GGATTGGCGC GCCGGCTTGC CGCAAACGCG CACGAACCCG AGAACATCGA CACGACCGCC CGACGCTATC TCGAATTGAT CGACACGATT GCGCCGTCAC GAATCGAAGC GGCATAA
|
Protein sequence | MRVLVAAHNH PALHPGGTEI FAHDLFRAYK RAGCESLFLG ATNQIHRQAR PGTSFQGIGP AGDELLLWSG HFDRFFMSQI DLYGVVPDLA ELLRDFRPDV VHIHHLLLLG AEFPHIVRRT LPECRIVMTL HDYYPICHHD GLMVRTSGKE LCHGASPDRC HACFKDIALD RFALRERHLK ALLSDVDRFV SPSNFLKTRF VEWGLSEDAI SVIPNGLPPR KEPAAVRRIG SDRPIFGYFG NLNPWKGVAV LLEAARQLIA EGLEFELRVH GGAPFQSESF VEEITRLFQE TAPTVQQRGP YRREDVIDLV ASVDCTIVPS IWWENAPLVI QEAQALGRPV IASNIGGMAE LIEDGSNGLT VAPNDPRALA SAMRRLAQDG GLARRLAANA HEPENIDTTA RRYLELIDTI APSRIEAA
|
| |