| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4685 |
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| Symbol | |
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| ID | 5319327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1200706 |
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| End bp | 1202304 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640776483 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001313415 |
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| Protein GI | 150376819 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.192999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.292705 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTAC TCAGACATAA TCTCGCCGGC GCGGCGCTCA TCTGTTCGCT GCTCATGGGG
GCAAGCCCCG CGCTCGCCCA GGCGGTACTT CACCGCGGCA ATGCCGGCGA GCCGCAGACG
CTCGACCAGG CTCACACCTC CATCAATATC GAGGAGTTCA TTCTCAAGGA CCTCTATGAA
GGCCTGACCA TCTATGATGC CGCGGGAAAG ATCGTACCGG GTGCCGCCGA AACCTGGGAG
CTTTCGGATG ATGGTACCGT CTATACCTTC AAACTGCGTG CCGATGCCAA GTGGTCTGAC
GGCTCACCGG TGACGGCAGA AGATTTCGCC TTCTCCCTCC GTCGGGTGGA AGATCCGAAG
ACGGCGGCCG AGTACGCCAA TATCCTGTTC CCGATCAAGA ACGCGGAAAA GGTCAACAAG
GGCGAACTGC CGGTCGACCA GCTCGGCGTG AAGGCCGTCG ACGAGAAGAC GCTCGAAGTC
ACCCTCGAAC GTCCGACGCC TTTCTTCCTG GAACTGCTCG CACATCAGAC GGCTCTTCCG
GTCAGCAAGG CCAACGTCGA GAAGAACGGT GCCGACTTCG TGAAGCCGGG CGTGATGGTT
TCGAACGGGG CCTTCAAACT GGCGTCACAT GTGCCGAACG ACAGTCTGAC CGTGGAGAAG
AACACGAACT ACTGGGATGC CGCCAACGTC AAGCTCGACA AGGTGATCTT CTATCCGATC
GATGATCAGG CCGCCTCGGT GCGCCGTTTC GAAGCGAAGG AAATGGACCT CGCCTATAAC
TTCTCGGCCG ACCAGATCGA CCGCCTGCGT AAATCCTATG GTGAACAGGT GCACGTTTCT
CCGACGCTTG CGACCTACTA CTACGCTTTC GACACGCGCC AGGAGCCCTA CAACGATGTC
CGGGTCCGCC GGGCACTCTC TATGGCGGTT GACCGCGACT TCCTTGCCAA GGAAATCTAC
AGCGGCTCGC AGCTGCCGTC CTATTCGATG GTGCCGCCAG GCATCGAGAG CTACGGAGAT
CCCGCCAAGG CCGATTTCGG GGACATGTCG CAACTCGACC GCGAGGACAA GGCGATCGAG
TTGATGAAGG AAGCCGGCTA CGGCGAAGGC GGCAAGCCGC TCAACATCGA AATCCGCTAC
AACACCAACC CCAACCATGA GCGTGTCGCG ACCGCGGTTG CCGACATGTG GAAGAACACC
TTCGGTGCCA AGGTCTCGCT GGTGAATCTC GATGTGTCGT CCCACTACGC CTATCTGCAG
GAAGGCGGCA AGTTCAACGT CGCGCGCGCA GGCTGGGTCG CCGATTACGC CGATGCCGAG
AACTTTCTGG CGCTGAGCCT CAGCACCAAC AAGACGTTCA ATTACGGCCA CTTCGAAAAT
GCGGAATTCG ACGCGTTGAT GAAGAAATCC TATGAAGAAC AGGATCCTGC AGCACGTTCG
AAAATCCTGC ATGAGGCCGA AACGCTGCTG ATGAAGGAAC AGCCGATAGC GCCCCTCCTG
ACCCAGGCCG ACCTCTGGCT CGTTTCGGAA CGGGTCCAGG GTTGGGTGGA CAATGCGCCG
AACGCTCACC TGAGCAAGTT CCTGAGCATC GCCGAGTAA
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| Protein sequence | MALLRHNLAG AALICSLLMG ASPALAQAVL HRGNAGEPQT LDQAHTSINI EEFILKDLYE
GLTIYDAAGK IVPGAAETWE LSDDGTVYTF KLRADAKWSD GSPVTAEDFA FSLRRVEDPK
TAAEYANILF PIKNAEKVNK GELPVDQLGV KAVDEKTLEV TLERPTPFFL ELLAHQTALP
VSKANVEKNG ADFVKPGVMV SNGAFKLASH VPNDSLTVEK NTNYWDAANV KLDKVIFYPI
DDQAASVRRF EAKEMDLAYN FSADQIDRLR KSYGEQVHVS PTLATYYYAF DTRQEPYNDV
RVRRALSMAV DRDFLAKEIY SGSQLPSYSM VPPGIESYGD PAKADFGDMS QLDREDKAIE
LMKEAGYGEG GKPLNIEIRY NTNPNHERVA TAVADMWKNT FGAKVSLVNL DVSSHYAYLQ
EGGKFNVARA GWVADYADAE NFLALSLSTN KTFNYGHFEN AEFDALMKKS YEEQDPAARS
KILHEAETLL MKEQPIAPLL TQADLWLVSE RVQGWVDNAP NAHLSKFLSI AE
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