Gene Smed_4661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4661 
Symbol 
ID5319336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1172681 
End bp1173052 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content61% 
IMG OID640776459 
Productregulatory protein ArsR 
Protein accessionYP_001313391 
Protein GI150376795 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.330103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00772902 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTCTAC CACATCCGAC ACCAGACCAG ATCGCTCTGT CCAATGTACT CGCGGCCCTC 
GGCGACCCGA CGCGGCTGGC GATCGTGGGC TATCTCGCCA GTCGAGATGG ACGGCCGACC
ATGTGTCTGA ACTTCACGAC TTTCGGTTCC AAGACCAATA TCAGCTATCA TCTCGCCAAA
CTGCGCGAGG CTGGCATCAC GCGCACCGAG GTGTCCGGCA CGAGCCGGTT GATCACCTTG
CGGCGGGACG ATCTCGACAT TCGCTTTCCC GGTCTCCTCG ATCCCATCAT CGCCGCCGCG
ATGGACCTGC CCATGGTCAA GATGATCGAG GACGCAGAGA AGGACGCTTT GGCGAAAGGC
GAGCCGGGAT GA
 
Protein sequence
MTLPHPTPDQ IALSNVLAAL GDPTRLAIVG YLASRDGRPT MCLNFTTFGS KTNISYHLAK 
LREAGITRTE VSGTSRLITL RRDDLDIRFP GLLDPIIAAA MDLPMVKMIE DAEKDALAKG
EPG