Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4633 |
Symbol | |
ID | 5319268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 1143097 |
End bp | 1143552 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640776431 |
Product | RbsD or FucU transport |
Protein accession | YP_001313363 |
Protein GI | 150376767 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4154] Fucose dissimilation pathway protein FucU |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.457707 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAGA ATATCGACCC GGCTCTGAAT GCCGATGTGC TGCATGCGTT GCGCTCTATG GGGCATGGTG ACACGCTTGT GATTTCCGAT ACCAATTTCC CGTCGGATGC CATCGCACGA CAGACCACGC TCGGCAAATT GCTGCATATC GACAATGTTT CGGCGGCGCG CGCGGCGAAG GCTATCCTTT CGGTGCTTCC CCTCGATACG CCGCTGCAGC CTTCGGCCGG GCGCATGGAG GTCATGGGCG CACCCGACGA GGTCCCGGGC GTGCAACGCG AGGTGCAGGC CGAAATCGAT CGCGCCGAGG GGAAGCCCGC GCCGATGTAC GGCATCGAGC GTTTTGCCTT CTATGAGGAA GCGAAGAAGG CCTATTGCGT CATCACCACC GGCGAGACAC GGTTTTACGG CTGCTTTCTT TTTACCAAAG GCGTCGTTCC GCCAGAAACC ATCTGA
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Protein sequence | MLKNIDPALN ADVLHALRSM GHGDTLVISD TNFPSDAIAR QTTLGKLLHI DNVSAARAAK AILSVLPLDT PLQPSAGRME VMGAPDEVPG VQREVQAEID RAEGKPAPMY GIERFAFYEE AKKAYCVITT GETRFYGCFL FTKGVVPPET I
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