Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4588 |
Symbol | |
ID | 5319004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 1083849 |
End bp | 1085048 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640776389 |
Product | hypothetical protein |
Protein accession | YP_001313321 |
Protein GI | 150376725 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.597366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGCAGC CGGCCGACAG GGAATTTTAC GCGAACCTTC CGCTTTTCGA GGCATTCGAA GGTGTCGCAG ACGAGGCCAA TTACCGGCCC CTGCCCGAAG GCTGGTGGCT TGCCGTTGCC GACATCGTGG ATTCGACGGG AGCCATCGCG GAAGGGCGAT ACAAGAGCGT GAACATGGCC GGCGCGAGCG TCATCTCCGC GCTCATGAAT GCGCTTGACG AGAAAAATCT CGCCTTCGTT TTCGGTGGCG ACGGTGCGCT CGCCGTCGTG CCCGGCGGGC TGGCGGCAAA GGCAAAACAC GCGCTCGCTG CGGCGAAAAC ATGGGTTGCG GAAGAGCTTG GACTGGAGCT TCGCGCTGCG ATCGTCCCGG TCTCGGACGT GCGCGCCAAT GGCTTCGACA TGCGCGTTGC GCGCTTCAAG GCGAGCGAGG TGGTCTCCTA TGCCATGTTC TCCGGCGGCG GCGCCAGCTG GGCGGAAGCG GAAATGAAGG CAGGCCGTTA TCAGATTGCG GCCGCCCCGA CCGGCACACG GCCCGACCTG ACCGGGTTGT CCTGCCGGTG GAACCCGATC GTCTCACATC ACGGGGCGAT CGTATCCATC ATCGCAGTGC CGGGAGAGCG CGGCATCGGA CCTGAATTCC AGGCTTTGAT CGGCGACATC GTGGAACTGG CCGAAGGGGA GGAGCGGGGT GGGCACCCCG TACCGGAAAA CGGTCCCGAG CCGCATCTGT CGGTGCGCGG CATCACGGTG GAATCGCGCG CCGTCGCGCC GAGAGGCCGC CGCTCCCTGG CTTGGTTCTT CGTCGCCGCG CAGAGCCTTG CTCTCTTTCT CTGCTTCAGG CTCGGCATCA ATTTCGGCCC CTTCGACGTC AAGCGATATG CGCGCGACCT TGCCAGCAAT TCGGACTTCC GCAAGTTTGA TGACGCTCTG AAGATGACGA TCGACGTCAG TCTCGATCGG CTGCGCAGAA TCGAGGAGCG GCTGAAGCAA GGGGTCGCGG CGGGCATATG CCGCTACGGA CTGCACCGGC AGGATGCGGC ACTGATGACG TGCATCGTAC CGACGCCGAT GAGCCGCGAC CACATGCACT TCATCGACGG GGCGGCCGGC GGGTACGCGG TGGCCGCCCG GAACCTGAAG GCCACCCTTG CCGGCAGCGT TTCACAGGCG GGAAGTCTAC CTTCGATGAT TAAGCCTTGA
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Protein sequence | MVQPADREFY ANLPLFEAFE GVADEANYRP LPEGWWLAVA DIVDSTGAIA EGRYKSVNMA GASVISALMN ALDEKNLAFV FGGDGALAVV PGGLAAKAKH ALAAAKTWVA EELGLELRAA IVPVSDVRAN GFDMRVARFK ASEVVSYAMF SGGGASWAEA EMKAGRYQIA AAPTGTRPDL TGLSCRWNPI VSHHGAIVSI IAVPGERGIG PEFQALIGDI VELAEGEERG GHPVPENGPE PHLSVRGITV ESRAVAPRGR RSLAWFFVAA QSLALFLCFR LGINFGPFDV KRYARDLASN SDFRKFDDAL KMTIDVSLDR LRRIEERLKQ GVAAGICRYG LHRQDAALMT CIVPTPMSRD HMHFIDGAAG GYAVAARNLK ATLAGSVSQA GSLPSMIKP
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