Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4556 |
Symbol | |
ID | 5318418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 1042246 |
End bp | 1043127 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640776357 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001313289 |
Protein GI | 150376693 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.357658 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGGCA CCTGGATCTC AACGCGCGCG TGGCTTCTGA TGCTTCCGCT CCTCGTGGTG ATGACCGCCG TCATCGGCTG GCCGCTCATC GACACCGTGC GGCTTTCCTT CACCGACGCC AAGCTCATCG GAACCGAAGG CGGCTTCGTC GGAGTGGACA ATTATGCAAG AATGCTCACT GGCTCGAACT TTCAGCGGGC GCTGATTACC ACCACCTGGT TCGCAGTCAT TTCGGTTGCG GCAGAAATGG TGCTCGGTGT CCTTGCGGCA CTCCTCCTTA ACCAGAAATT TCGTGGACGG ACGGCGCTCC GCGCACTGAT GATCCTGCCG TGGGCGCTTC CGACGGTAGT CAATGCGACG CTCTGGCGCC TCATCTACAA TCCGGAATAT GGCGCGCTCA ATGCGGGGCT GACCCAGATC GGCATCCTCG ACAGCTATCG CTCCTGGCTC GGCGAACCCG GAACGGCGCT TGCAGCGCTG ATCGTCGCGG ATTGCTGGAA GAACTTCCCG CTGGTGGCGC TGATCGCACT CGCCGCGCTT CAGGCTGTGC CGCGCGACAT CAATGCGGCA TCGATCGTCG ATGGTGCCGG TCCGTTCAAT CGATTTCGCT TCGTGATCCT GCCCTACCTC GCCGGTCCCT TGCTGGTGGC GCTGGTGCTG CGCACCATCG AGGCCTTCAA GGTGTTCGAC ATCATCTGGG TCATGACGCG CGGCGGACCG GCCAACAGCA CGCGCACGCT CTCGATCCTC GTCTACCAGG AAGCGTTTTC CTTCCAGCGA GCGGGCTCCG GCGCGTCGCT TGCCCTCATT GTCACGCTGC TGGTGACCAT TCTTGCCGTC GCCTATGCCG CGCTGCTGCG CAAGGCCGCC GGAGCTTCGT GA
|
Protein sequence | MTGTWISTRA WLLMLPLLVV MTAVIGWPLI DTVRLSFTDA KLIGTEGGFV GVDNYARMLT GSNFQRALIT TTWFAVISVA AEMVLGVLAA LLLNQKFRGR TALRALMILP WALPTVVNAT LWRLIYNPEY GALNAGLTQI GILDSYRSWL GEPGTALAAL IVADCWKNFP LVALIALAAL QAVPRDINAA SIVDGAGPFN RFRFVILPYL AGPLLVALVL RTIEAFKVFD IIWVMTRGGP ANSTRTLSIL VYQEAFSFQR AGSGASLALI VTLLVTILAV AYAALLRKAA GAS
|
| |