Gene Smed_4388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4388 
Symbol 
ID5318358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp882626 
End bp883723 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content58% 
IMG OID640776192 
Producthypothetical protein 
Protein accessionYP_001313125 
Protein GI150376529 
COG category[S] Function unknown 
COG ID[COG2899] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGAG GCAGCACACA GACAAGCTCT CTCGGATACT TCAAATGGGC GTTCATCGTT 
ACGGGTGCAG GGCTTCTGCT TGGCGCCTGG CTCGGCTGGC AGTCGACCGG GACCCTGGGC
GGTATGATGA CGGTGTTCTT CATCTGCACC GTGCTCGCGG TCCTCGAAAT CTCGCTGTCC
TTCGATAATG CCATCGTTAA TGCCAACAAG CTCAAGGACA TGACCCCGGT CTGGCAGCAG
CGCTTCCTGA CGTGGGGCAT CCTCATCGCC GTTTTCGGCA TGCGTATCGT GTTCCCTTTG
TTGATCGTGG TCATCGCCGC GAGCATTGGT CCGATCGAGG CGGTCATTCT CGCTGCAACG
CAGCCCGAGG AATATTCGCG CATCATGCAC GAAGCGCATC TCCCGATCGC TGCCTTCGGC
GGTACGTTCT TGATGATGGT CGGACTCACA TACTTTTTCG ACCATGAAAA GGACGTGCAC
TGGATTGCAT GGCTGGAGAG CCGGATGGCG CGCTTTGCGA CCATTAAGGG AGTCGAGATC
GCCTTCGTTC TGGCGCTCAT ACTCGGCTTT TCGAAGTTGC TCGAAGCGGA TGAAGCCGTC
GTGTTCGTTC ATGCCTGCGT CTACGGCCTC CTTACCTTCC TGGCCGTCGA AGTGGTCGGC
GGCCTACTTG ACGCTTCGCA GCAGACGATG AGCGCAGCGG CGAAGGGCGG ATTTGGCGCT
TTCCTCTATC TGGAAGTGCT CGACGCCAGC TTTTCCTTCG ATGGGGTCAT AGGCGCCTTC
GCTTTGACCC AGAACCTTTT CATCATTGCC ATCGGGCTCG GTATCGGCGC GATGTATGTC
CGCTCCATGA CGATCATGCT GGTCGAGAAG AAAACGCTCA GCGAATATCG TTATCTGGAA
CACGGCGCAT TCTACGCCAT CCTGATCCTT TCCGTGGTCA TGTATTTCCA GACGCTGGTC
CATATTCCAG AGGTCATTAC TGGGCTCGGT GGGGCCGGCC TCATCGGCCT TTCCCTCTGG
TCCTCGGTCC GACATAACCG GCGGGAAATG GAGCAGGTCG AGGACGACAC GCGCGGACGG
AGGCGCGTCG AGGCCTGA
 
Protein sequence
MTGGSTQTSS LGYFKWAFIV TGAGLLLGAW LGWQSTGTLG GMMTVFFICT VLAVLEISLS 
FDNAIVNANK LKDMTPVWQQ RFLTWGILIA VFGMRIVFPL LIVVIAASIG PIEAVILAAT
QPEEYSRIMH EAHLPIAAFG GTFLMMVGLT YFFDHEKDVH WIAWLESRMA RFATIKGVEI
AFVLALILGF SKLLEADEAV VFVHACVYGL LTFLAVEVVG GLLDASQQTM SAAAKGGFGA
FLYLEVLDAS FSFDGVIGAF ALTQNLFIIA IGLGIGAMYV RSMTIMLVEK KTLSEYRYLE
HGAFYAILIL SVVMYFQTLV HIPEVITGLG GAGLIGLSLW SSVRHNRREM EQVEDDTRGR
RRVEA