| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4353 |
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| Symbol | |
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| ID | 5318202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 850833 |
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| End bp | 852446 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640776158 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_001313091 |
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| Protein GI | 150376495 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.201059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.455905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCGGC GCAGCGAGCC CGAGGGACAG GGATTACGCC ATGGAAGGCC TTCACAGCGC
CTTCGCCCGG CTGGGGGTTC GTTGCTTGAC TTCGTGCCGG CCTCGGCGGA AGAGACTGCT
CCTCCCGAAG AGGCGCGCAC TCTAGAGAAG GTTGGCGCCT CCGTCCGTGT CGTGGACCTG
CCGGCTCCGA GCCATAACGC ACGCGCTCCT GAGGAGCCGG CGTCCGCCGC CGATTTCTTC
CCGCAACTCC ACCTTTTAGG CAGCATCGGG ATCAACGACA TCATCGTCTG GCTTCGCGAC
GGGATCCGCT GGATCGTCAT CGCGCTCCTC CTCTCCGGTG CCGCGGCTTT CGCTTATGCC
GTGACGGCGA CGCCGCGATA CACCGTTTAC ACCGACCTCG TCGTGGACCC TTCCAATCTC
AACGTCGTAA GCGACGACGT TTTCACGACC AATCCGCAGC GAGACGCGCA ATTGCTGGAG
GTCGAAAGCA AACTCCGGAT CCTGACATCG CGCAATGTGC TCCAGCGCGT GATCGACGAG
CTGCGGCTTT CCGAAGACCC GGAATTCGTC AAGCCGACCT TGCTGGACTG GCTGAAGGCG
CTGCTTGCCC CGCGGGACGG TAAGACAGAC AAGGATCTGG CGGCCATGCG CGTCCTGTCG
GAGAGGGTCG AAGCGCGCCG GGAGGAGCGC TCTTTCGTCG TGGTCCTGAA GGTCTGGAGC
GAGGAGCCTG CCAAAGCCAT CGCCCTTTCG GACGCGATCG TCGAGGCGTT CGAGGCGGAA
CTGTTCCAGT CGTCCGCCGA GAGTGCCGGC CGGGTGGCGC AGAACCTGAA CGCACGCCTC
GATGAACTGC GCCGCAACGT CACCGAGGCG GAAAGGAGGG TTGAGGACTT CCGCCGCCAG
AACGGTCTGC AATCCACCAA TGGCGAGCTC GTCAGCAATC AGCTTTCGAG CGAGCTCAAC
ACGCAGGTTC TGGACGGTCA GCAGCGCTTC ATTCAGGCGG AAACGCGCTA CAGGCAGATG
AGCTCCGCCG TTGCCGGGGG CCGGACCGCC AGCGCTTCGG TGTTCGAGTC GGCCAACATG
ACCGATCTGC GCCAGCAGTA TAATGCCTTG CAGCAGCAGA TAGGATCAAT GCAGCTTACC
TATGGAGAGC GGCATCCGCG GCTCGTCGCC GCCCGCTCCG AGCGTGCGAC GCTGGAAACC
GCGATGAAGG ATGAAGCCCG CCGCATTCTG GAGCGCGCAA AGGCCGATTT CGATCGGGAG
CGAAAGGCGC TCGCTACGCT GCGCGGCAAG GCGGACAACG AAAAATCGAA CGTCTTCACC
GATAATCAAG CCCAGGTGCA GCTTCGCGAC CTCGAGCGCG ACGCGCGCAG CAAGGCGGCG
ATCTACGAAA CGCACCTGGC ACGCGCACAG CAGATCACCG AGCGCCAGCA GATCGACACA
ACCAATGTCC GCGTCATCTC GCGCGCCCTG CCGCCGAATG CGCGAAGCTG GCCGCCTCGT
ACCCTGGTTC TCCTGATCGG CGGCGCCTTT CTGGGTCTCG CCCTCGGAAT TGCTACGGCC
CTCGCCCTCG GCCTTTGGCG GTTCCTTCGC GGCAAAACGC GCGCGGCTGC CTGA
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| Protein sequence | MYRRSEPEGQ GLRHGRPSQR LRPAGGSLLD FVPASAEETA PPEEARTLEK VGASVRVVDL
PAPSHNARAP EEPASAADFF PQLHLLGSIG INDIIVWLRD GIRWIVIALL LSGAAAFAYA
VTATPRYTVY TDLVVDPSNL NVVSDDVFTT NPQRDAQLLE VESKLRILTS RNVLQRVIDE
LRLSEDPEFV KPTLLDWLKA LLAPRDGKTD KDLAAMRVLS ERVEARREER SFVVVLKVWS
EEPAKAIALS DAIVEAFEAE LFQSSAESAG RVAQNLNARL DELRRNVTEA ERRVEDFRRQ
NGLQSTNGEL VSNQLSSELN TQVLDGQQRF IQAETRYRQM SSAVAGGRTA SASVFESANM
TDLRQQYNAL QQQIGSMQLT YGERHPRLVA ARSERATLET AMKDEARRIL ERAKADFDRE
RKALATLRGK ADNEKSNVFT DNQAQVQLRD LERDARSKAA IYETHLARAQ QITERQQIDT
TNVRVISRAL PPNARSWPPR TLVLLIGGAF LGLALGIATA LALGLWRFLR GKTRAAA
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