Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4262 |
Symbol | |
ID | 5319013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 750293 |
End bp | 751303 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640776067 |
Product | monosaccharide-transporting ATPase |
Protein accession | YP_001313000 |
Protein GI | 150376404 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0638371 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTGA ACGAGGAAAG CATCCAAAGC ACAACGCACC GCCGCACCTG GCGGGACGTG GATCTAAGGG CTGTCGCGCC ATTTGCCGCG CTTGCCCTGC TGTTGATCGT GGGCGCGCTG GTCAACCCCA ACTTCATCAG CCTCAACAAC CTTGCAAACG TCGCCACCCG CAGCGCCTTC ATCGCCATTA TCGCCGTGGG GGCCACCTTC GTCATTTCGG CAGGCGACCT CGACCTTTCC GTCGGTTCGA TGGTGGCCTT CGTTGCGAGC CTTATGATCA TTTTCATGAA TTCCGGTGTG ATCGCCGATC CGGCGTTGAT GCTTACGGCT GCAATCGTCT TCGCGGTTGC CGTCGGCGGC GCCTGCGGCC TCGCAAACGG ACTGATCACC ACCGTCGGCA GGATCGAGCC TTTCATTGCG ACGCTCGGCA CGATGGGCAT CTATCGCGGC CTTACGACCT GGCTCTCGCA AGGGGGCGCG ATCACGCTGC GCGAGCCGGA AATACAGGAA CTCTACCGCC CCGCCTATTT CGGCAGCATA TTCGGCGTCC CTGTTCCGAT CGCGATCATC CTCGCCGTTA CCGCCGTTGC CGCTTTCATT CTCTACCGCA CCCGTTACGG CAGACACGTG GTCGCCGTTG GCTCCAACAG CGACGTCGCC CGCTATTCCG GCATCGCCGT CAACCGCGTG CGCACCATCG CCTTCGTAAT CCAGGGGCTC TGCGTCGCCG TAGCGGTGCT GCTCTACGTG CCGCGCCTCG GCTCGACCTC GGCGACCACG GGCATTCTCT GGGAGCTGCA GGCGATCACC GCGGTCGTCG TCGGCGGCAC GGCGCTCAAG GGCGGCGCGG GCCGCGTCTG GGGCACGATC TGCGGTGCAT TCATTCTCGA ATTGGTCGGC AACATCATGC TCCTGTCGAA TTTCATCAGC GAATACCTGA TCGGCGCGAT GCAAGGTGCG ATCATCATCA TCGCGATGCT CGTCCAGCGT TCGCTGGTGC GTAAATCGTG A
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Protein sequence | MSVNEESIQS TTHRRTWRDV DLRAVAPFAA LALLLIVGAL VNPNFISLNN LANVATRSAF IAIIAVGATF VISAGDLDLS VGSMVAFVAS LMIIFMNSGV IADPALMLTA AIVFAVAVGG ACGLANGLIT TVGRIEPFIA TLGTMGIYRG LTTWLSQGGA ITLREPEIQE LYRPAYFGSI FGVPVPIAII LAVTAVAAFI LYRTRYGRHV VAVGSNSDVA RYSGIAVNRV RTIAFVIQGL CVAVAVLLYV PRLGSTSATT GILWELQAIT AVVVGGTALK GGAGRVWGTI CGAFILELVG NIMLLSNFIS EYLIGAMQGA IIIIAMLVQR SLVRKS
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