Gene Smed_4109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4109 
Symbol 
ID5318998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp573829 
End bp574296 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content58% 
IMG OID640775916 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001312849 
Protein GI150376253 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCAT TCAATCTCGA CGCTATCGAC CGAAAAATTC TAAGAATTCT CCAGGATCGG 
GGCGACATCA GCCATGCGGC AATCGCCGAG GCGGTCGGCG CTTCGCCGGC ATCCTGCTGG
CGGCGGATCA AAGCCCTGGA GACGGCGGGC GTTCTGGTGA AGACCGTAAG CCTCGTCGAT
CCCGACCTGG TCGGACGCGG ATTGAACGTG TTCTGCCAGG TGCGCATGAA GTCTCATGAT
CCGCTGGCGC GGCGCAATTT CGAGCGCTTC GTGGAAAGCC ATGAGGAGGT CCTCGAATGC
TATTCCATGT CGGGCGACTG GGACTATCTT TTAAGGGTCC TCGTCGCTGA CGTCGCCGAC
TATGAGCGCC TGCTGATGCG AGGTATCCTC ACCCATGAGG CCGTCGCCAA TTCTTCGTCT
CATTTCGCCT TGAAGAGCGT CAAATACTCG ACCGCCGTTC CGGTGTAG
 
Protein sequence
MNSFNLDAID RKILRILQDR GDISHAAIAE AVGASPASCW RRIKALETAG VLVKTVSLVD 
PDLVGRGLNV FCQVRMKSHD PLARRNFERF VESHEEVLEC YSMSGDWDYL LRVLVADVAD
YERLLMRGIL THEAVANSSS HFALKSVKYS TAVPV