Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4109 |
Symbol | |
ID | 5318998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 573829 |
End bp | 574296 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640775916 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001312849 |
Protein GI | 150376253 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCAT TCAATCTCGA CGCTATCGAC CGAAAAATTC TAAGAATTCT CCAGGATCGG GGCGACATCA GCCATGCGGC AATCGCCGAG GCGGTCGGCG CTTCGCCGGC ATCCTGCTGG CGGCGGATCA AAGCCCTGGA GACGGCGGGC GTTCTGGTGA AGACCGTAAG CCTCGTCGAT CCCGACCTGG TCGGACGCGG ATTGAACGTG TTCTGCCAGG TGCGCATGAA GTCTCATGAT CCGCTGGCGC GGCGCAATTT CGAGCGCTTC GTGGAAAGCC ATGAGGAGGT CCTCGAATGC TATTCCATGT CGGGCGACTG GGACTATCTT TTAAGGGTCC TCGTCGCTGA CGTCGCCGAC TATGAGCGCC TGCTGATGCG AGGTATCCTC ACCCATGAGG CCGTCGCCAA TTCTTCGTCT CATTTCGCCT TGAAGAGCGT CAAATACTCG ACCGCCGTTC CGGTGTAG
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Protein sequence | MNSFNLDAID RKILRILQDR GDISHAAIAE AVGASPASCW RRIKALETAG VLVKTVSLVD PDLVGRGLNV FCQVRMKSHD PLARRNFERF VESHEEVLEC YSMSGDWDYL LRVLVADVAD YERLLMRGIL THEAVANSSS HFALKSVKYS TAVPV
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