Gene Smed_3969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3969 
Symbol 
ID5319067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp419904 
End bp420734 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content62% 
IMG OID640775778 
Productalpha/beta hydrolase fold 
Protein accessionYP_001312711 
Protein GI150376115 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAGA ACTTCATCAC GACGGAAGAC GGTGTCGAGA TCTTCTACAA GGATTGGGGC 
TCCGGCCAGC CGATCGTGTT CCATCACGGA TGGCCGCTTT CCTCCGACGA CTGGGACGCC
CAGATGCTTT ACTTCCTGAG CAAGGGATAC CGAGTGATCG CCCACGACCG GCGCGGCCAC
GGCCGCTCGA CCCAGATAAG CGACGGGCAT GACATCGCGC ATTACGCGGC GGACGTGGCG
GCACTCGCCA CGGAGCTCGA CCTGCGCGAC ACCATCCACA TAGGACACTC CACCGGCGGC
GGCGAGGCTC TGGCCTATGT CGCCCGGCAT GGTGCCGGCC GTGTCGCCAA GCTCGTGATG
GTCGGCGCCG TGCCGCCGAT CATGCTCAAG ACCGAAGCCT ATCCGGGCGG GCTTCCGATG
GAGGTGTTCG ACGGTCTTCG CGCTCAGCTC GCGGCAAACC GCTCCCAGTT CTTCCTCGAT
CTGCCGAGTG GCCCCTTCTA TGGCTTCAAT CGCCCCGACG CGAAGGTCTC AACCGGCGCG
ATCCAGAATT GGTGGCGGCA GGGGATGATG GGAAGCGCGA AGGCCCATTA CGAGGGCATC
AAGGCATTCT CCGAGACGGA TTTCACTGAG GATCTCAAGA AGATCGAGGT CCCGACGCTC
GTCATGCACG GCGACGACGA CCAGATCGTG CCCATCGACA GCTCCGCGCG GCTTGCCGTC
AAACTTCTGA AGAACGGCAC GCTGAAGGTC TACGAAGGAT ACCCGCACGG CATGTTGACG
ACGCATGCCG ATGTGATCAA CCCGGATCTG CTCGCCTTCA TCAAGGGTTA G
 
Protein sequence
MTKNFITTED GVEIFYKDWG SGQPIVFHHG WPLSSDDWDA QMLYFLSKGY RVIAHDRRGH 
GRSTQISDGH DIAHYAADVA ALATELDLRD TIHIGHSTGG GEALAYVARH GAGRVAKLVM
VGAVPPIMLK TEAYPGGLPM EVFDGLRAQL AANRSQFFLD LPSGPFYGFN RPDAKVSTGA
IQNWWRQGMM GSAKAHYEGI KAFSETDFTE DLKKIEVPTL VMHGDDDQIV PIDSSARLAV
KLLKNGTLKV YEGYPHGMLT THADVINPDL LAFIKG