Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3969 |
Symbol | |
ID | 5319067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 419904 |
End bp | 420734 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640775778 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001312711 |
Protein GI | 150376115 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAGA ACTTCATCAC GACGGAAGAC GGTGTCGAGA TCTTCTACAA GGATTGGGGC TCCGGCCAGC CGATCGTGTT CCATCACGGA TGGCCGCTTT CCTCCGACGA CTGGGACGCC CAGATGCTTT ACTTCCTGAG CAAGGGATAC CGAGTGATCG CCCACGACCG GCGCGGCCAC GGCCGCTCGA CCCAGATAAG CGACGGGCAT GACATCGCGC ATTACGCGGC GGACGTGGCG GCACTCGCCA CGGAGCTCGA CCTGCGCGAC ACCATCCACA TAGGACACTC CACCGGCGGC GGCGAGGCTC TGGCCTATGT CGCCCGGCAT GGTGCCGGCC GTGTCGCCAA GCTCGTGATG GTCGGCGCCG TGCCGCCGAT CATGCTCAAG ACCGAAGCCT ATCCGGGCGG GCTTCCGATG GAGGTGTTCG ACGGTCTTCG CGCTCAGCTC GCGGCAAACC GCTCCCAGTT CTTCCTCGAT CTGCCGAGTG GCCCCTTCTA TGGCTTCAAT CGCCCCGACG CGAAGGTCTC AACCGGCGCG ATCCAGAATT GGTGGCGGCA GGGGATGATG GGAAGCGCGA AGGCCCATTA CGAGGGCATC AAGGCATTCT CCGAGACGGA TTTCACTGAG GATCTCAAGA AGATCGAGGT CCCGACGCTC GTCATGCACG GCGACGACGA CCAGATCGTG CCCATCGACA GCTCCGCGCG GCTTGCCGTC AAACTTCTGA AGAACGGCAC GCTGAAGGTC TACGAAGGAT ACCCGCACGG CATGTTGACG ACGCATGCCG ATGTGATCAA CCCGGATCTG CTCGCCTTCA TCAAGGGTTA G
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Protein sequence | MTKNFITTED GVEIFYKDWG SGQPIVFHHG WPLSSDDWDA QMLYFLSKGY RVIAHDRRGH GRSTQISDGH DIAHYAADVA ALATELDLRD TIHIGHSTGG GEALAYVARH GAGRVAKLVM VGAVPPIMLK TEAYPGGLPM EVFDGLRAQL AANRSQFFLD LPSGPFYGFN RPDAKVSTGA IQNWWRQGMM GSAKAHYEGI KAFSETDFTE DLKKIEVPTL VMHGDDDQIV PIDSSARLAV KLLKNGTLKV YEGYPHGMLT THADVINPDL LAFIKG
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