| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3927 |
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| Symbol | |
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| ID | 5318763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 379584 |
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| End bp | 380270 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640775737 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_001312670 |
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| Protein GI | 150376074 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGAGA CGACCATCAT AGCCCCTTCG GTTCTGTCGG CCGACTTCTC GCGGCTCGGC
GAAGAGGTCG AAGCGGTGTG CCGGGCCGGT GCGGACTGGA TTCATCTCGA CGTCATGGAC
GGGCATTTCG TGCCCAACAT CACCTTCGGC CCGCCGGTCA TCAAGGCACT GCGGGACCGC
ACGGACAAGG TGTTCGACTG CCATCTGATG ATCGCACCGC CCACACCCTA TCTCGGTGCT
TTCGCCTGCG CCGGATGCGA TATCATCACC GTGCACGCGG AAGCGACCAC GCATCTCGAT
CGAACGCTGC AGGCCATCCG CGATGTCGGC TGCAAGGCGG GCGTATCCCT CAACCCTTCG
ACGCCCGAAA GCGTGATCGA ATACGTGCTG GACCGGCTGG ACCTCGTCCT CCTGATGACG
GTCAATCCGG GTTTCGGGGG TCAGGATTTC ATTCCGGCCG TAATCGAGAA GGTGCGGCGC
GTGAAGTCGC TGATCGGCAA TCGTCCGATC CACATCGAGA TCGACGGAGG CGTGACGCCG
GAAACCGCGC CGCTGGTTGC CGCGGCCGGT GCGGATGTGC TCGTTGCCGG CTCGGCGGTT
TTCAAGGGAG GCAGCGAGGA GCACTACGCC AGGAACATCA CAGCCATTCG CGCCGCCTCG
GACGGCGCCA TCAGGAAAGC AGCCTAA
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| Protein sequence | MNETTIIAPS VLSADFSRLG EEVEAVCRAG ADWIHLDVMD GHFVPNITFG PPVIKALRDR
TDKVFDCHLM IAPPTPYLGA FACAGCDIIT VHAEATTHLD RTLQAIRDVG CKAGVSLNPS
TPESVIEYVL DRLDLVLLMT VNPGFGGQDF IPAVIEKVRR VKSLIGNRPI HIEIDGGVTP
ETAPLVAAAG ADVLVAGSAV FKGGSEEHYA RNITAIRAAS DGAIRKAA
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