| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3919 |
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| Symbol | |
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| ID | 5318704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 370585 |
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| End bp | 371526 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640775729 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001312662 |
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| Protein GI | 150376066 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAACG TGTCCCTCCG CCAGCTCCGT ACCGTTGAAG CCGTCTGCCG GTTGGGAAAG
ATCAACCTTG CCGCCGAAGC ACTTGGATTG ACCGGACCGG CGCTCACCCT GCAGATTCAG
CATCTCGAAC GGGACACCGG CGTTGCACTC TTCGACCGGA CGCGCGGCGG CATGGTGCCG
ACGGCCTATG GCCTTGCCTT TCTTGAGGCG GCACGCGCGG TTGAGGACAG CCTGGCCGCC
CTTGAGGATT CGATCGGTGC CATCAGTGGG CTCAGAACCG GACGTTTGCG CCTCGGGGTC
GTGTCGACCG GCAAGTATTT CGCGCCGCAA CTGATCGCCG CTTTCCGCGA CCAGGTTCCA
GCCGTCGAGA TAAATCTATT CATCGGCAAC CGCGCCGAGA TCATAGCCAA GCTGCGGGAC
CACGAGATCG ACATCGCGCT GATGGGGCGG CCGCCGCGTG ATTTCGAGGT GCGCGCGCAG
GTATTCGGCG ATCATCCTCT GGTCTTCATA GCACCCGCCG GACACCCGCT CGCAGGCGTG
CTGGAGATTT CGCGGGAGCG GATCGCGCGG GAGCAGTTCC TGGTGCGTGA AAAAGGATCG
GGGACACGTA TTTCGCTCGA GATCTTTCTG AGCGATACCC CGCACGAACT GGAGGAACTC
GGAACCGAGA TCGCTTCGAA CGAGACGATC AAGCAAGCGG TCATTGCCGG TCTTGGGATT
GCCTTCATCT CGGCCCACAC GATCGAGCAG GAGGTGAAGC TCGGACGGCT GGTAATACTC
GACGTCATCG ACACGCCTAT ACGCCGGCAA TGGTTCACGG TTTCACGCCT GGACCGTGCG
GCCACACCGG CAATGCAGGC TTTCGAACAA TTCGTGCTGT CGTCGGGCGC TCGCTATCTG
CCCGTTGTCA GCAAGCCATA CCCGGCCAAC GCGTTCGGCT AG
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| Protein sequence | MRNVSLRQLR TVEAVCRLGK INLAAEALGL TGPALTLQIQ HLERDTGVAL FDRTRGGMVP
TAYGLAFLEA ARAVEDSLAA LEDSIGAISG LRTGRLRLGV VSTGKYFAPQ LIAAFRDQVP
AVEINLFIGN RAEIIAKLRD HEIDIALMGR PPRDFEVRAQ VFGDHPLVFI APAGHPLAGV
LEISRERIAR EQFLVREKGS GTRISLEIFL SDTPHELEEL GTEIASNETI KQAVIAGLGI
AFISAHTIEQ EVKLGRLVIL DVIDTPIRRQ WFTVSRLDRA ATPAMQAFEQ FVLSSGARYL
PVVSKPYPAN AFG
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