| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3863 |
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| Symbol | |
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| ID | 5318300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 320381 |
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| End bp | 321382 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640775675 |
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| Product | hydroxyproline-2-epimerase |
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| Protein accession | YP_001312608 |
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| Protein GI | 150376012 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3938] Proline racemase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.365358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCC ACACCTTCTC CTGCATAGAC GGCCACACCT GCGGAAATCC CGTCCGCCTC
GTCTCTGGCG GGGGGCCGCG CCTGGAAGGC GCGAACATGC TGGAAAAGCG CGCGCATTTC
CTCAAGGAAT TCGACTGGAT CCGCACCGGC CTCATGTTTG AGCCGCGCGG TCACGACATG
ATGTCGGGCT CCATTCTCTA TCCGCCGACG CGGCCCGATT GCGACGTCGC GGTGCTCTTC
ATCGAGACCT CCGGCTGCCT GCCCATGTGC GGCCATGGTA CCATCGGCAC CATCACCATG
GGGATCGAGA ACGGCCTGAT CACACCGCGT GAGCCCGGCA GGCTCTCCAT CGATGCCCCC
GCCGGCAAGG TGGACATCAC CTACCGCCAG GAAGGCCGCT TCGTCGAGGA AGTGCGCCTC
ACCAATGTTC CCGGCTTCCT TTATGCCGAA GGGCTGACGG CCGAGGTCGA GGGCCTGGGC
GAAATCGTGG TGGACGTTGC CTATGGCGGC AATTTCTACG CCATCGTCGA GCCGCAGAAA
AACTTCCGCG ACATGGCCGA TCATACGGCG GGGGAACTGG TGGGCTGGAG CCCGAAGCTG
CGTGCCGCGC TGAACGAAAA ATACGAGTTC GTCCATCCCG AGCACCCGGA GATCCGGGGC
TTGAGCCATA TCCAGTGGAC CGGAAAGCCG ACGCAATCCG AGGCACACGC CCGCAACGCG
GTGTTCTACG GCGAGAAGGC CATCGATCGC TCGCCCTGCG GAACGGGCAC CTCGGCCCGC
ATGGCGCAGC TCGCCGCCAA GGGAAAGCTG AAGGTGGGCG ACGAATTCGT TCACGAGTCG
ATCATCGGAT CGCTCTTCAA GGGACGCGTC GAGGCGGCCG CGAAGGTCGC GGATCGCGAT
GCGATCATCC CATCGATTGC CGGCTGGGCA AGGATGACCG GCATCAACAC CATTTTTATC
GATGACCGCG ACCCCTTCGC CCATGGCTTC GTCGTAAAAT GA
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| Protein sequence | MATHTFSCID GHTCGNPVRL VSGGGPRLEG ANMLEKRAHF LKEFDWIRTG LMFEPRGHDM
MSGSILYPPT RPDCDVAVLF IETSGCLPMC GHGTIGTITM GIENGLITPR EPGRLSIDAP
AGKVDITYRQ EGRFVEEVRL TNVPGFLYAE GLTAEVEGLG EIVVDVAYGG NFYAIVEPQK
NFRDMADHTA GELVGWSPKL RAALNEKYEF VHPEHPEIRG LSHIQWTGKP TQSEAHARNA
VFYGEKAIDR SPCGTGTSAR MAQLAAKGKL KVGDEFVHES IIGSLFKGRV EAAAKVADRD
AIIPSIAGWA RMTGINTIFI DDRDPFAHGF VVK
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