| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3859 |
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| Symbol | |
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| ID | 5318296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 315667 |
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| End bp | 316875 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640775671 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001312604 |
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| Protein GI | 150376008 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.526422 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGTT CGCATTATCG CTGGGTGATC GTTGCTGCAG GCGGCCTGCT GGGGTGTATT
GCAATCGGTG CCATGTTTTC CTTGCCGGTT TTCCTCGTCC CCATCTCGCG CGATACCGGA
TGGTCGGTGA CCGGCATCTC GAGCGCCATG ACCGTGGGTT TCCTTGCCAT GGCGCTCGCA
AGCATGGTCT GGGGTAGCGC CTCGGATCGC TGGGGGCCGC GCCCGGTCGT GCTCATCGGA
TCGGCGCTCC TTGCTTCCAG CCTGGCTCTT TCGAGTTTCG TGACCTCGCT CATCGCATTT
CAGCTCATCT TCGGCGTTTT CGTCGGCGGT GCCTGCGCGG CGATATTCGC GCCGATGATG
GCTTGCGTTA CGGGCTGGTT CGATACGCAT CGGAGCCTTG CCGTATCGCT GGTATCGGCC
GGCATGGGGA TGGCGCCCAT GACCATGTCT CCGCTGGCCG GCTGGCTGAT AACGATCTAC
GACTGGCGCA CATCGCTGCA GATCATAGCC GCCATTGCCG CCGTCACGAT GATTCCAGCC
GCGATGCTGC TGCGTCGCCC GCCGGTCCTG GAAGATCCGA ATGCCGGCCC TGCAAGCGAG
GGACAACCGG ACATGTCGCT TGGCCAGGCC TTGCGATCGC CGCAATTCGT CATCTTGCTG
CTGACGAACT TCTTCTGCTG CGCCACCCAT TCGGGCCCGA TTTTCCACAC CGTGAGCTAT
GCCGTGAGCT GCGGTATCCC GATGATGGCC GCGGTTTCCA TCTACAGCCT CGAGGGGCTG
GCGGGGATGG GCGGCCGTGT TGCCTTCGGC ATCCTCGGAG ACCGCTACGG CGCGAAGCGT
ATTCTCGTAT CGGGTCTGCT GCTGCAGGCT TTCGGCGCGC TCGCCTATTT CTTCGTGCGC
GACCTCGGCG CTTTTTATGC AGTGGCTGCC TTGTTCGGCT TTATCTATGC AGGCGTCATG
CCGCTTTACG CGGTGATCGC CCGAGAAAAC TTCCCGCTGC GTATGATGGG CACCGTAATC
GGCGGCACGG CAATGGCCGG CAGCCTCGGC ATGGCGATCG GCCCGGTTGC CGGAGGCGTG
ATCTACGATG TTTTCGCCAG CTACGGTTGG CTCTATATCG GCGCCTGGGG CATCGGCATC
GGTGCTTTCC TGATCGCGCT GACCTTCAAG CCTTTCCCCA AACGACGGCC GGCAGCGGCG
GCCGCTTGA
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| Protein sequence | MISSHYRWVI VAAGGLLGCI AIGAMFSLPV FLVPISRDTG WSVTGISSAM TVGFLAMALA
SMVWGSASDR WGPRPVVLIG SALLASSLAL SSFVTSLIAF QLIFGVFVGG ACAAIFAPMM
ACVTGWFDTH RSLAVSLVSA GMGMAPMTMS PLAGWLITIY DWRTSLQIIA AIAAVTMIPA
AMLLRRPPVL EDPNAGPASE GQPDMSLGQA LRSPQFVILL LTNFFCCATH SGPIFHTVSY
AVSCGIPMMA AVSIYSLEGL AGMGGRVAFG ILGDRYGAKR ILVSGLLLQA FGALAYFFVR
DLGAFYAVAA LFGFIYAGVM PLYAVIAREN FPLRMMGTVI GGTAMAGSLG MAIGPVAGGV
IYDVFASYGW LYIGAWGIGI GAFLIALTFK PFPKRRPAAA AA
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