Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3782 |
Symbol | |
ID | 5317950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 228829 |
End bp | 230046 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640775595 |
Product | major facilitator transporter |
Protein accession | YP_001312528 |
Protein GI | 150375932 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.22509 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAATC CTTACGGAGA AATATTTAGG GCGCCGGGGG CCAAGGGCTT CTCGGCAGCC GGCTTCTTCG CGCGACTTCC GATAGCGATG GCCCCGATCG GCATCGTCGC AATGGTGTCT CAGACCCACG GCGAATACTG GCTGGCGGGC GCGGTCTCCG CGACCTTCGC CCTCACCAAC GCGCTCGTCG CCCCGCAGAT ATCGCGTCTG GTCGACCGCG TCGGCCAGAC GGCCGTTGTC GTTCCGACGA CGATCGTCTC GGTCGCAGCC TTCCTGGCGC TGATCATTGC GGCCAACCGC GACTGGGCGG CGTGGACGCT GTTCGTTTTG GCTTTCCTCG CCGCCGCGAT GCCGAGCATG CCCGCGCTCG TTCGCGCCCG CTGGACGGAA ATATTCCGCA ATCGGCCCGA GCTGAACACC GCCTTCGCAT TCGAGTCTTC GGCAGACGAG CTTGTCTACA TTTCCGGGGC TTCGCTGTCG GTTGGCCTGG CGGTTGCGCT GTTCCCCGAA GCCGGCATGC TGACAAGCAC TATCTTTCTC GCCCTTGGGA CGGCCGCATT CATTCTGCAG CGTTCGACCG AGCCGAAGGT GCATCCCATC GAGGCCAGCG CCTCGCAAGC GTCGGCGATC CGTCAAAGAC CGGTACAGAT CATCACCCTT GCGCTTATCT TCGTCGGCTC GATCTTCGCG ACAGCGGAGG TCAGTGTCGT GGCGATCACG AAAGAGCTCG GGCAGCCGCA GGCAGCCAGC CTGGTCATCG GCGTCTACGC CGTCGGCTCG TTCCTGGTGG GGCTGGCACT TGGCGCGCTG AACCCGACCA TGCCGCTGCA GAGGCAGCTT CTGATCGCCG TCAGTGTAAT CGCCATCACG TCCCTCCCTC TCCTCGTGGC CGATACGGTT CCGTTCCTTG CATTTGCTGT CTTTGTCAGC GGCATAGCCA TCTCACCGAC CTTCATCACA GCTTTCGGTT TGATTGAGCG CCGTGTACCG GAATCGATGC TGACGGAAGG CGTCACCTGG GTCATGACGG GAATTGGTAT AGGCATGGCG CTCGGCGCAT TCGTGTCAGG CTGGGTTGTC GACAATTACG GCGCGCAGAA GGGTTTCTGG GTATCCGTGG CGGCCGGGGC GGCGACCGTC GTCACGGTGG CGGCGGGTCA GCGCAGCCTT GCCGGCAGCA AAGCGATGCC GGCAGCGGTT CCGCTTCCCG CCGAGTAG
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Protein sequence | MSNPYGEIFR APGAKGFSAA GFFARLPIAM APIGIVAMVS QTHGEYWLAG AVSATFALTN ALVAPQISRL VDRVGQTAVV VPTTIVSVAA FLALIIAANR DWAAWTLFVL AFLAAAMPSM PALVRARWTE IFRNRPELNT AFAFESSADE LVYISGASLS VGLAVALFPE AGMLTSTIFL ALGTAAFILQ RSTEPKVHPI EASASQASAI RQRPVQIITL ALIFVGSIFA TAEVSVVAIT KELGQPQAAS LVIGVYAVGS FLVGLALGAL NPTMPLQRQL LIAVSVIAIT SLPLLVADTV PFLAFAVFVS GIAISPTFIT AFGLIERRVP ESMLTEGVTW VMTGIGIGMA LGAFVSGWVV DNYGAQKGFW VSVAAGAATV VTVAAGQRSL AGSKAMPAAV PLPAE
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