| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3773 |
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| Symbol | |
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| ID | 5318221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 218670 |
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| End bp | 219824 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640775586 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001312519 |
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| Protein GI | 150375923 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.265534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.799504 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCAC GAAGTGCCCT CAACCGACCG TCTGTCTCCA GTCTCCTGAG CCTAATCCTG
CTTGGCGCCG TTCTCTCCGG CTGCACGGAA GAAAAGGCCG AGACGAAGGA AGTGATACGG
CCGGTCAAGG TCGTGGAGAT AGCCGCGGCG GGTAAGCCAA GGGAGCTCCA CTATTCCGGC
TCTGTAAGAG CGCGCACGGA AATGAATCTG GGCTTCCGTG TGGGCGGCAA GATCACCGAG
CGCCTCGTCA ATATCGGCGA TAGGGTTGAA CCAGGTGATG TTCTCGTCCG CGTCGACGCC
ACCGACTATC AGCTTGCGGT GCGGAGCGCC GAGGCAAGTC TGCTCGCGGC CGAAAAGCAG
GTGCAGACGA CGGGGCTTGC GAAGCTCAGA GCCGAACAGC TTTTCAACAA ATCCTTCTCC
TCACAGGCCC AGCTCGATCA GGCAACCCTA CTTTACGATC AGGCGGTCTC AACGCGCGAC
GCCGCGGCAT CGTCGCTCAG CCAGGCGAAG AACCAGGTAA ACTATACGGA CCTCAAGGCC
GACCAGAACG GCATCGTCAC GGACGTAAAC GCCGATATAG GCCAGGTCGT CGGCACCGGA
ACGCCCGTCG TGACTGTCGC AGTCGACGGG GAGAAGGAAG TCGAAGTCGC GGTGCCCGAA
ATCGACATCG CCGAATTCAG GCCGGGCAAA CCGGTGCAGG CGCGTTTCTG GTCGGACGAC
ATGCTCGTGC TCGACGGCCA TGTGCGCGAA GTTTCCGGCA GCGCCGACCC GCGCTCACGC
ACCTTTTCGG TGCGCGTCGG CCTGCCGAAA GACGAGCGCG TGCTCCTCGG CATGACGGCG
ACGGTCGAGG CGACTGCAGG AAGCTCGGCG CCGCTCTTTT CCATCCCGCT GAGTGCGCTG
TCGAAGAAGG ATGGCCAGAA TATCGTCTGG ATCGTTGATC GTGACTTCTC GACCGTCCAT
GCACGCCCGG TCAAGCTTGC CGACTTCGCC GATAACGGCG TGCGCGTCGT CGAGGGCCTC
GGCGCCGGCG ACCTCGTTGT TGCCGCGGGC ACACAATTCA TGGCCGAGGA TCTGAAAGTG
AGGCTGCAGG CGGACGAACA GCAATCGGCC GAGCAACAGT CCGCCCGGGC CGAAACGCCC
GAACTCCTCC GCTAA
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| Protein sequence | MSSRSALNRP SVSSLLSLIL LGAVLSGCTE EKAETKEVIR PVKVVEIAAA GKPRELHYSG
SVRARTEMNL GFRVGGKITE RLVNIGDRVE PGDVLVRVDA TDYQLAVRSA EASLLAAEKQ
VQTTGLAKLR AEQLFNKSFS SQAQLDQATL LYDQAVSTRD AAASSLSQAK NQVNYTDLKA
DQNGIVTDVN ADIGQVVGTG TPVVTVAVDG EKEVEVAVPE IDIAEFRPGK PVQARFWSDD
MLVLDGHVRE VSGSADPRSR TFSVRVGLPK DERVLLGMTA TVEATAGSSA PLFSIPLSAL
SKKDGQNIVW IVDRDFSTVH ARPVKLADFA DNGVRVVEGL GAGDLVVAAG TQFMAEDLKV
RLQADEQQSA EQQSARAETP ELLR
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