| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3728 |
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| Symbol | |
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| ID | 5318594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 171511 |
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| End bp | 172536 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640775541 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001312474 |
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| Protein GI | 150375878 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.183496 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTCAAG CCCTACGCAT CCTGACGAAC GAGCGCCAAA GGCTGCTCGC AGTCCGCTCG
CTGAATTCCG TTGAAAGCGC TCCGACACCC GAACTCGCGA CCCTCGCCGA GCTTGCTAAA
GGCGTATTCG GCGTCTCCTA CGCCGCCATC AACATCATCG ACGAGGATTG GCAGAGGATC
GCCGGTCAGG CGGGCTTGAG GATCGGCGAA TGCTCGCGCG AGATGTCCAT ATGCACGCGG
GTCGTCTTCG AAGACGAATT GCTTGTTATT CCCGATCTGA CGGAAGACCA GGACCTGAGA
TCGAGGCCGT ACGTCGTCGG AAGCCCGCAT TTCCGCTTCT ACGCCGGCGC GCCCGTCTAT
CTGGACAACC TGCCCGTCGG GAGCTTCTGT ATTCTCGATG GCCGGCCCGG AAATCTCTCC
GACGGACAGG CCCTGAACCT GCGCCGCTTC GCTGAAGTCG CCAGCGCTCT GTTGAGCCTC
CAGAAAGCCA ATCTGGTTAT GGGGCTTGCC CACAACCAGC TACAGAATGC GGCAATCACC
GATCCGCTCA CGGGTCTCTT CAATCGCTCC GCCCTGTCCT CGATCGTCGA TGGGGCACTC
GACAATGCGA TGACCGCGGG TCAGACTTTC GGGGCCCTTT ATCTCGACAT GGATGGTTTC
AAGGCGATCA ACGACAAGCT GGGCCATCAG GTCGGCGACG CGGTTCTGTA CGAGGCCGCC
AATCGAATTC GCTCGGTCAT CAGAGCGGGC GACATTCCGG TTCGCATGGG CGGCGACGAA
TTCGCCGTTT TTGTTCCAAA TCCGCCCAAT GCACCGGCCC TGGCAGCGGT TTCGCAGCGA
CTGGTCTCGG TTTTTCGCGA GCCCGTAGAG GTCGATGGCG AGGCCATCCA GGCGCGTATC
AGCATCGGCG GCGCCCTCGC CCCGGATAAC GGGCGCCGGC GGGCGGATCT GCTGAACAGC
TGCGACAAGG CTCTCTACGC GGCAAAGCGG GGCGGTCGCG ACCGGTTCGT CGTCGTCGGC
GCCTGA
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| Protein sequence | MGQALRILTN ERQRLLAVRS LNSVESAPTP ELATLAELAK GVFGVSYAAI NIIDEDWQRI
AGQAGLRIGE CSREMSICTR VVFEDELLVI PDLTEDQDLR SRPYVVGSPH FRFYAGAPVY
LDNLPVGSFC ILDGRPGNLS DGQALNLRRF AEVASALLSL QKANLVMGLA HNQLQNAAIT
DPLTGLFNRS ALSSIVDGAL DNAMTAGQTF GALYLDMDGF KAINDKLGHQ VGDAVLYEAA
NRIRSVIRAG DIPVRMGGDE FAVFVPNPPN APALAAVSQR LVSVFREPVE VDGEAIQARI
SIGGALAPDN GRRRADLLNS CDKALYAAKR GGRDRFVVVG A
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