Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3724 |
Symbol | |
ID | 5318590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 165777 |
End bp | 167033 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640775537 |
Product | ribulose-bisphosphate carboxylase |
Protein accession | YP_001312470 |
Protein GI | 150375874 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.630821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCCACA TAACCTACCG GATAGAGACA CCAGGAGACG TCGAGGCGCT GGCGAGAAAA ATCGCAAGCG ACCAATCAAC GGGGACGTTC GTTGCTGTGC CGGGGGAAAC GGAGGAGCTG AAGCGGCGGG CAGCTGCACG CGTCGTGGCC ATTCGCCACC TCCCACCGGC CGACCGGGCG TCGTTGCCGG ACGAGGCTGG AGACGCAACG CGTTTCAACC GGGCCGATGC GGAGATCGCA TATCCTCTTG AAGCGGTGGG AACGGACCTG TCCGCCCTGA TGACCATTGC AATCGGCGGC GTCTATGCCA TCAAAGGCAT GACCGGAATC CGTGTTGTCG ACATGAAACT CCCGCCGGAG TTCGCGGCGG CGCATCCGGG TCCGCAATTC GGGGTCGCCG GCAGTCGCCG CCTGACCGGT GTCGAAGGCC GCCCCATTAT CGGCACGATC GTCAAGCCGG CGCTCGGCCT GCTGCCGGAC GAAACGGCAG CGCTCGTAGG CGACCTGCTT TCTTCCGGCG TCGACTTCAT CAAGGACGAC GAGAAGCTGA TGAGCCCGGC CTATTCGCCG CTGAGTGCGC GCATCGCCGC CATCATGCCG AAGATACGCG ACCATGAGCA GAAGACCGGC AAGAAAGTCA TGTATGCCTT CGGCATATCC CATACCGATC CCGATGAGAT GATGCGGAAC CACGATCTCG TGGTCGCCGC TGGTGGCAAT GCGGCGGTCG TCAATATCAA TTCGATCGGC ATGGGCGGTG TCGCCTTCCT GCGCAAGCGC TCGAACCTCG TGCTCCACGC CCACCGTAAC GGCTGGGACA TTCTCACGCG CCATGGCGGC CTGGGGATGG AGTTTTCGGT GTGGCAGCAG TTCTGGCGCC TCCTCGGAGT GGATCAGTTC CAGATCAACG GCATCCGCGT CAAATACTGG GAGCCGGACG ACAGTTTCGT GAAGTCCTTC AAGGCGGTAA GCACGCCGCT GTTTTCCAGG GAGGATTGCC CGCTGCCGGT CGTGTGCTCC GGCCAATGGG GAGGACAGGC GCCCGAGACC TTTGTACGCA CCGGACGTAC GACCGATCTG CTCTATCTCT GCGGTGGCGG AGTCGTAAGC CACCCGGGCG GAGCCGGTGC CGGCGTGCGA GCCGTGCGTC AGGCATGGGA GGCGGCAGTC GCCGGGATAC CGCTCTCGGA TTATGCTAAG GAGCACCCCG AACTGGCGCA ATCGATCGAG AAATTCGCCG ACGGAAAGGG CGCTTGA
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Protein sequence | MIHITYRIET PGDVEALARK IASDQSTGTF VAVPGETEEL KRRAAARVVA IRHLPPADRA SLPDEAGDAT RFNRADAEIA YPLEAVGTDL SALMTIAIGG VYAIKGMTGI RVVDMKLPPE FAAAHPGPQF GVAGSRRLTG VEGRPIIGTI VKPALGLLPD ETAALVGDLL SSGVDFIKDD EKLMSPAYSP LSARIAAIMP KIRDHEQKTG KKVMYAFGIS HTDPDEMMRN HDLVVAAGGN AAVVNINSIG MGGVAFLRKR SNLVLHAHRN GWDILTRHGG LGMEFSVWQQ FWRLLGVDQF QINGIRVKYW EPDDSFVKSF KAVSTPLFSR EDCPLPVVCS GQWGGQAPET FVRTGRTTDL LYLCGGGVVS HPGGAGAGVR AVRQAWEAAV AGIPLSDYAK EHPELAQSIE KFADGKGA
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