Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3704 |
Symbol | |
ID | 5318424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 145403 |
End bp | 146779 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640775517 |
Product | hypothetical protein |
Protein accession | YP_001312450 |
Protein GI | 150375854 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.464833 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCGAGA ATAGCAACGA ACTCACTGCC TGGGACCGCG ACCACTTCTT CCATCCCTCG ACCCATATGG GAATGCACGC GCGCGGCGAG ACCCCGACCC GTGTGATCGG GGGCGGCGAA GGCGTCTACA TAACCGATAT TTCCGGCAAG CGGAGCCTCG ATGCCTTTGC AGGCCTCTAC TGCGTCAATG TCGGCTACGG CCGTCAGAAG ATCGCCGATG CGATTGCGGA ACAGGCGAAG AACCTCGCCT ATTATCATGC CTATGTGGGC CACGGCACGG AGGCCTCGAT CCGGCTTTCC AAAATGATTA TCGACCGGGC ACCGGAAGGC ATGTCGCGCG TCTATTTCGG TCTGTCAGGT TCGGACGCCA ACGAAACCAA CATCAAGCTG ATCTGGTACT ACAATAACAT TCTTGGCCGG CCGGAGAAGA AGAAGATCAT CTCGCGCTGG CGGGGCTATC ACGGCTCGGG CGTGATGACC GGCTCGCTGA CCGGTCTTCA CCTCTTCCAC AATGCTTTCG ATCTGCCGCG CGCGCCGATC CTGCACACCG AAGCACCCTA TTATTTCCGC CGCCCGGACC GTTCGATGAG CGAGGAGCAA TTCTCGCAAT ATTGCGCCGA GAAGCTGGAG GAGATGATCC TCGCAGAGGG TCCCGACACC GTTGCCGCCT TCATCGGCGA GCCGATCCTC GGCACGGGCG GGATCGTGCC GCCGCCGAAA GGCTACTGGG AGAAGATCCA GGGCGTTCTT CAGAAATACG ATATCCTCCT GGTTGCCGAT GAGGTGGTGA CAGGTTTCGG CCGTCTCGGT ACCATGTTCG GTTCCGACCA CTACGGCATC AAGCCGGACC TCATCACCAT CGCGAAGGGG TTGACCTCGG CCTACGCCCC GCTGTCCGGC ACGATCGTCG CCGACAAGGT CTGGCAGGTG CTGGTAAAGG GATCGAATGA GCTCGGTGCC ATCGGCCATG GCTGGACTTA TTCCGCGCAT CCGATCTGCG CCGCAGCCGG CATTGCCAAT CTCGAGCTGA TCGACGAACT CGGCATCGTG GAGAATGCCG GTACGACGGG CGCCTATTTC CGCGAAGAAC TGCAGAAGGC TATCGGCGAT CACCGCAATG TTGGCGAAGT GCGCGGCGAC GGGTTGATGG CGGCGATCGA GTTCGTTGAG GACCGGGACG ACCGCGCCTT CTTCGACCCG GGCCGCAAGA TCGGGCCGCA GGTGGCAACA GCGCTCCTCG AACGCGGCGT CATCGGCCGT GCCATGCCGC AGGGCGACAT TCTCGGCTTT GCACCGCCGC TCTGCTTGAC GCGTGATGAA GCCGACATCG TCGTCAAGGC GGCGACCGAT GCCATCCAGT CCGTATTCGA CCGCTGA
|
Protein sequence | MLENSNELTA WDRDHFFHPS THMGMHARGE TPTRVIGGGE GVYITDISGK RSLDAFAGLY CVNVGYGRQK IADAIAEQAK NLAYYHAYVG HGTEASIRLS KMIIDRAPEG MSRVYFGLSG SDANETNIKL IWYYNNILGR PEKKKIISRW RGYHGSGVMT GSLTGLHLFH NAFDLPRAPI LHTEAPYYFR RPDRSMSEEQ FSQYCAEKLE EMILAEGPDT VAAFIGEPIL GTGGIVPPPK GYWEKIQGVL QKYDILLVAD EVVTGFGRLG TMFGSDHYGI KPDLITIAKG LTSAYAPLSG TIVADKVWQV LVKGSNELGA IGHGWTYSAH PICAAAGIAN LELIDELGIV ENAGTTGAYF REELQKAIGD HRNVGEVRGD GLMAAIEFVE DRDDRAFFDP GRKIGPQVAT ALLERGVIGR AMPQGDILGF APPLCLTRDE ADIVVKAATD AIQSVFDR
|
| |