Gene Smed_3704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3704 
Symbol 
ID5318424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp145403 
End bp146779 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content61% 
IMG OID640775517 
Producthypothetical protein 
Protein accessionYP_001312450 
Protein GI150375854 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.464833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAGA ATAGCAACGA ACTCACTGCC TGGGACCGCG ACCACTTCTT CCATCCCTCG 
ACCCATATGG GAATGCACGC GCGCGGCGAG ACCCCGACCC GTGTGATCGG GGGCGGCGAA
GGCGTCTACA TAACCGATAT TTCCGGCAAG CGGAGCCTCG ATGCCTTTGC AGGCCTCTAC
TGCGTCAATG TCGGCTACGG CCGTCAGAAG ATCGCCGATG CGATTGCGGA ACAGGCGAAG
AACCTCGCCT ATTATCATGC CTATGTGGGC CACGGCACGG AGGCCTCGAT CCGGCTTTCC
AAAATGATTA TCGACCGGGC ACCGGAAGGC ATGTCGCGCG TCTATTTCGG TCTGTCAGGT
TCGGACGCCA ACGAAACCAA CATCAAGCTG ATCTGGTACT ACAATAACAT TCTTGGCCGG
CCGGAGAAGA AGAAGATCAT CTCGCGCTGG CGGGGCTATC ACGGCTCGGG CGTGATGACC
GGCTCGCTGA CCGGTCTTCA CCTCTTCCAC AATGCTTTCG ATCTGCCGCG CGCGCCGATC
CTGCACACCG AAGCACCCTA TTATTTCCGC CGCCCGGACC GTTCGATGAG CGAGGAGCAA
TTCTCGCAAT ATTGCGCCGA GAAGCTGGAG GAGATGATCC TCGCAGAGGG TCCCGACACC
GTTGCCGCCT TCATCGGCGA GCCGATCCTC GGCACGGGCG GGATCGTGCC GCCGCCGAAA
GGCTACTGGG AGAAGATCCA GGGCGTTCTT CAGAAATACG ATATCCTCCT GGTTGCCGAT
GAGGTGGTGA CAGGTTTCGG CCGTCTCGGT ACCATGTTCG GTTCCGACCA CTACGGCATC
AAGCCGGACC TCATCACCAT CGCGAAGGGG TTGACCTCGG CCTACGCCCC GCTGTCCGGC
ACGATCGTCG CCGACAAGGT CTGGCAGGTG CTGGTAAAGG GATCGAATGA GCTCGGTGCC
ATCGGCCATG GCTGGACTTA TTCCGCGCAT CCGATCTGCG CCGCAGCCGG CATTGCCAAT
CTCGAGCTGA TCGACGAACT CGGCATCGTG GAGAATGCCG GTACGACGGG CGCCTATTTC
CGCGAAGAAC TGCAGAAGGC TATCGGCGAT CACCGCAATG TTGGCGAAGT GCGCGGCGAC
GGGTTGATGG CGGCGATCGA GTTCGTTGAG GACCGGGACG ACCGCGCCTT CTTCGACCCG
GGCCGCAAGA TCGGGCCGCA GGTGGCAACA GCGCTCCTCG AACGCGGCGT CATCGGCCGT
GCCATGCCGC AGGGCGACAT TCTCGGCTTT GCACCGCCGC TCTGCTTGAC GCGTGATGAA
GCCGACATCG TCGTCAAGGC GGCGACCGAT GCCATCCAGT CCGTATTCGA CCGCTGA
 
Protein sequence
MLENSNELTA WDRDHFFHPS THMGMHARGE TPTRVIGGGE GVYITDISGK RSLDAFAGLY 
CVNVGYGRQK IADAIAEQAK NLAYYHAYVG HGTEASIRLS KMIIDRAPEG MSRVYFGLSG
SDANETNIKL IWYYNNILGR PEKKKIISRW RGYHGSGVMT GSLTGLHLFH NAFDLPRAPI
LHTEAPYYFR RPDRSMSEEQ FSQYCAEKLE EMILAEGPDT VAAFIGEPIL GTGGIVPPPK
GYWEKIQGVL QKYDILLVAD EVVTGFGRLG TMFGSDHYGI KPDLITIAKG LTSAYAPLSG
TIVADKVWQV LVKGSNELGA IGHGWTYSAH PICAAAGIAN LELIDELGIV ENAGTTGAYF
REELQKAIGD HRNVGEVRGD GLMAAIEFVE DRDDRAFFDP GRKIGPQVAT ALLERGVIGR
AMPQGDILGF APPLCLTRDE ADIVVKAATD AIQSVFDR