| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3669 |
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| Symbol | |
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| ID | 5318066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 107941 |
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| End bp | 108918 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640775482 |
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| Product | putative cellulase H precursor protein |
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| Protein accession | YP_001312415 |
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| Protein GI | 150375819 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4124] Beta-mannanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.55561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00741413 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACAGGA AATCAAAGGC CGTTGCGTTC GGATGTCTCG GACTATTGCT GTCGGGGACA
GTGCTCGCAG CCAATATGCC TCGAGGTATC CCCGACGAGA ACTCGCCGAC GAAGGCAACG
CCATCGGACA AGCGGCCGGT GCTGACAGAG ACTTCCCTCG ATTTCGGCGC TTACGATCCT
CATGGTGACT TCGGCACGCC TGGGAGCTCG AAGATCGAGC ATCTCTTCCT GCCCTGGGAA
GACGTCGATC TGTCGACCCT TGCGCTTGCC GACGACTATG CCCAGGCGCG AGGCCGCTCG
CTCCTGATTA CCATCGAACC CTGGTCGTGG TCGCCGGAGT GGCGCGTGAC CGAGGAAGAG
CTCCTGCGTT CGATTCTGAG CGGTGAGCGG GATCAGAACA TGGCCCAGGT CTGTTCGGCC
GCGGCGGCAC TGAAAAGCCC GGTGATCATC CGTTGGGGCC AGGAAATGGA CGAAACCGAC
AACCAGTTCT CCTGGTCGCA TTGGCGGGGC GAGGACTTCA AGGCAGCCTA TCGTCACGTG
GTGGGCGTCT GCCGGGGCCA TCTCAAGAAT GCGAAATTCA TGTGGTCGCC CAAGGGGAAC
GAGGGGTTGG ACGCCTTCTA TCCAGGTGAT GATGTCGTCG ATATCGTCGG GCTTTCGGTA
TTCGGCTACC AACCCTACGA CGAAGGCACG ACCGGGCGCG CTCAGACGTT CGTGGAGCGG
CTGGCGCCCG GTTACGGACG GGTGATGAAC TACGGCAAGC CGGTCATGGT CGCCGAGCTC
GGCTATGAGG GCGATGGCTC ATACGTCGCG AGCTGGGCGG CATCCGTTGC TGAGCGTCAC
GCCGAATTTC CGCAACTGAC AGCCGTGGTC TATTTCAACG ATCGCGAGAT CTATGACTGG
CCGCAAGGCT ATGGCCGCCC CGATTGGCGG GTCGTCCGCG AAACCATCAG CGGGCAAGCG
CCCGACGGAG GCATGTGA
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| Protein sequence | MNRKSKAVAF GCLGLLLSGT VLAANMPRGI PDENSPTKAT PSDKRPVLTE TSLDFGAYDP
HGDFGTPGSS KIEHLFLPWE DVDLSTLALA DDYAQARGRS LLITIEPWSW SPEWRVTEEE
LLRSILSGER DQNMAQVCSA AAALKSPVII RWGQEMDETD NQFSWSHWRG EDFKAAYRHV
VGVCRGHLKN AKFMWSPKGN EGLDAFYPGD DVVDIVGLSV FGYQPYDEGT TGRAQTFVER
LAPGYGRVMN YGKPVMVAEL GYEGDGSYVA SWAASVAERH AEFPQLTAVV YFNDREIYDW
PQGYGRPDWR VVRETISGQA PDGGM
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