| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3668 |
|---|
| Symbol | |
|---|
| ID | 5318065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 107432 |
|---|
| End bp | 107941 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640775481 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001312414 |
|---|
| Protein GI | 150375818 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.568701 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00584343 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCGA TGAACCGAGG AATACCGTTA GCCATCGTCC TGGTCGCCGG CCTTGCCACT
GCATCTTTTG CCGAGGCTGC CGCCGCGCGT GCCGACCGGA AGACAACTGC ACTGACACAC
GCGGAACTAT TCCAGCTCTA CGGCCAAAAA TCGTGGATCT GGAAAGAGGG CGCAGGCTAT
TTCTCAGTGC AGGCGCGCCG ATTCACCGCC TGGTCGAAGG AAAACGGCAA ACCGTCTTAC
GGCGTAGGCC GCTGGTTCAT CACCGGCCCC GGAAAGCTCT GCTTCCGTGC CGATTGGCAT
GCAAAGGACG GCTCGGCGCC AGCGACAACC TGCTTCAGCC ACCGAAAGCG CGCTGGCGTG
ATCTATCAGA GGCGCGAACC GGACGGCGCC TGGTACGTCT TCAAGAACGC ACAGGTGAGG
CCAGATGACG AGTTCGTCAA GCTTAGGCGC GGCAATTATG TGGGCGCCAG GCTGAACCGC
ATCGAGGCGA GACTCGGCGG GGAAGAGTAA
|
|---|
| Protein sequence | MKSMNRGIPL AIVLVAGLAT ASFAEAAAAR ADRKTTALTH AELFQLYGQK SWIWKEGAGY
FSVQARRFTA WSKENGKPSY GVGRWFITGP GKLCFRADWH AKDGSAPATT CFSHRKRAGV
IYQRREPDGA WYVFKNAQVR PDDEFVKLRR GNYVGARLNR IEARLGGEE
|
|---|
| |