Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3657 |
Symbol | |
ID | 5318671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 95371 |
End bp | 96318 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640775470 |
Product | inner-membrane translocator |
Protein accession | YP_001312403 |
Protein GI | 150375807 |
COG category | [R] General function prediction only |
COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.103238 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGTTC TAGAAAAGAT CTTCAATTTC GCCCTGATCG CAGCCACGCT GCGCACCACC GCCCCCATCC TCCTGGTGTC GCTGGGCGGC TCGTTCACCA CCAAGGCGGG CATTTTCAAC ATCGGGCTCG AAGGTCAGAT GCTGGTCGGT GCCTTCTTCG GCGTGCTCGG TTCGATATGG ACGGGCTCCG CGCTTGGCGG GCTCCTGTGC GGTGTACTCG CGGCTGTCGT GATGGCCGCG ACCTTCTCGC TTCTCGTGGT GACGCTCAGG GCGAATGAAG TGGTCGTTGG CCTTGCGCTC AACATCCTAG CCGGCGGGCT GACGATCTCG CTGACGAAGG CCATTTTCGG CACCCGCGGC TCCATCGTCA GCGGCGACAT CGTCGGCCTG CCGCCGATCG ACATTCCGTT CATCGAGGAT CTCGGTCGGT TCGGCCGGGT TCTGTCCGGC TATACGCCCC TCGTCTATCT CGCCTTTGTC ATGGTCTTCG TGGTCTGGCT GGTGCTCTAT CGCACCAAAC TCGGCCTTTA TATCCGCGTC ACCGGAGAGA AGCCGGAAGC TGCCGAGGCG CTGGGCATCC CGACGGCTCT CATGCAGCAC ATCGCGTCGC TTCTCTGCGG GGTACTCGCA GGGCTGGCAG GCGCGCACCT GTCTCTCGGC TATATCACGA TGTTTGCGGA AAACATGTCC TCCGGCCGCG GTTTCATGGC GGTTGCGGTG CTGATCTTCT CCAATGGCGA TCCCTTGAAG GTTCTGCTCG GCTGCCTGCT GTTCGGCTTT TCCGATGCCG CCTCGCTGCG GCTGCAGACC TTCGGTTTTC CGTCCTACAT CGTCCTGATG GTGCCCTATC TGGTGACCCT CGGCGCATTG TTCGCCCTGA CCTATCGCCA GCGGCCCAAG GTTATTCGCG AAACACTCGA AAGCCTGTCG CTGTTGCGGC GCACCTGA
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Protein sequence | MEVLEKIFNF ALIAATLRTT APILLVSLGG SFTTKAGIFN IGLEGQMLVG AFFGVLGSIW TGSALGGLLC GVLAAVVMAA TFSLLVVTLR ANEVVVGLAL NILAGGLTIS LTKAIFGTRG SIVSGDIVGL PPIDIPFIED LGRFGRVLSG YTPLVYLAFV MVFVVWLVLY RTKLGLYIRV TGEKPEAAEA LGIPTALMQH IASLLCGVLA GLAGAHLSLG YITMFAENMS SGRGFMAVAV LIFSNGDPLK VLLGCLLFGF SDAASLRLQT FGFPSYIVLM VPYLVTLGAL FALTYRQRPK VIRETLESLS LLRRT
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