Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3653 |
Symbol | |
ID | 5318400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 90568 |
End bp | 91407 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640775466 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001312399 |
Protein GI | 150375803 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.532841 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.819978 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGCA GGAAGCATGT GGTCGTGACC GGTGCGGCAG GCCTTCTCGG ACGTCATGTC GCCGGAGCCT ATCGCCAGGC AGGATTTGCG GTTACGGCTC TGGATCATGA ACCCCGCGGC CTGGAGGATG TGATCGGAGC CGACCTCATG GATCCGGATG TCGCCAGGCG CCACATTGCC GACGCGGATC TGGTTGCCCA TATCGCGTCG ATCCCTCGGC CGGTCGGATA CGATGCCGGC CAGGTGTTTC AGACCAACAT GACGCTGATG TTCAACGTGC TCGCCGCGAC GGAAGCCGCG GGCATTTCAC GCCTGTTGTT TGCCTCCTCC TTCAGCGTGC TCGGCCTTCC TTTCGCACCG CGTCCGGTCG AGCTCAATTA TCTGCCTGTC GACGAGCACC ATCCGGCGCA ACCGCAGGAC GTCTATGCCG TTACCAAATG GCTGGGCGAG GAAATGGTCG ATGCGTGGAC CCGGCGGATC GGGGGATCGG CAATCAGCCT GCGCATGCCC TGGATCCAGA CACCCGAAAG TTTCATGTTC GAGGTAGCGA AACGGCGTTT GACGGAGGAG GCCGCTCTCG ATCTCTGGGC CTACATAGAC GCCCGGGACG CAGCCCGGGC GTTCCTGCTG GCGGCGAACG CTCAGACGCC CGGTCACGAG CGGTTCTTCA TTTCCGCGGG CGACAGCTAC AGTGAGACAC CGACGGCCGA CCTGCTGGCG GCGCGATATC CCGGAACCCA GGTCCGAACT TCGCTCGAAG GCCATGCTGG CCTACTCTCC AACGACCGGG CAAAGCACCT TATCGACTTC GTTCCGCGTT ATTCGTGGCG CGATTATTAG
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Protein sequence | MAGRKHVVVT GAAGLLGRHV AGAYRQAGFA VTALDHEPRG LEDVIGADLM DPDVARRHIA DADLVAHIAS IPRPVGYDAG QVFQTNMTLM FNVLAATEAA GISRLLFASS FSVLGLPFAP RPVELNYLPV DEHHPAQPQD VYAVTKWLGE EMVDAWTRRI GGSAISLRMP WIQTPESFMF EVAKRRLTEE AALDLWAYID ARDAARAFLL AANAQTPGHE RFFISAGDSY SETPTADLLA ARYPGTQVRT SLEGHAGLLS NDRAKHLIDF VPRYSWRDY
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