Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3605 |
Symbol | |
ID | 5318439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 33759 |
End bp | 34751 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640775419 |
Product | monosaccharide-transporting ATPase |
Protein accession | YP_001312352 |
Protein GI | 150375756 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTCG ACATATTGCC GGTTGCGCAC GACGCGCGCA GGCCGGCCTG GAAACGGATC GGGACGATGC GCGAGGCCGG GCTGATCGCG ATCATCCTTT CGCTCTGCGT GATCATGAGC TTCGCCTCGC CGCACTTTCT GACCCTCGGC AATTTTCGGG CGATGCTCAT GTCCTTCTCC GTCGAGGGGA TTGTCGTCGT CGGCATGACG ATCCTGCTGA TCGTCGGCGG CATCGATCTT TCTGTCGGTT CCGTCGTCTG TTTCTCTATG GTGCTCTCCG GCTCGCTCTT CCTGATGGGG GTCGACCCTT GGACGGCATC GCTCGTCGGA ATTGCCGCCA GTGCGGCCAT CGGATGCATC ATGGGCTTCT TCGTGACCGT GGTCGGGCTC AACCATTTCA TAACGTCCCT TGCGGCCATG GTGATCGTGC GCGGTCTCTG CCTGGTGATC ACCAAAGGCA CGCCGCTGTC GCTCTTCACC TTGCCGCCCG CCTTCAAGGC GGTCGGCCAA GGGACCTTTT TTGGCGTACC CTATGTGATC GTGATCTTCA TCGCCGTCGT TGCCGTGTTC GACTTCCTCC TTCGCCGGGC AACCGCGTTC CGCAAGGTCT TCTATACCGG CAGCAACGAG AAGGCCGCCC TTTATTCCGG TATCAAGACC AAGGACGTCA AATTCTGGGT GACGGTCCTT TGCACGACGC TCTCGGGTGT GGCGGGGACC ATCTATATGG CGCGCTTCGG TGCGGCGACG CCGACCTTCG GGGTCGGCAT GGAACTCAAC ATTATCGCCG CGGCAGTGAT CGGCGGCGCC TCCCTCAACG GCGGATCGGG CACGATCCTG GGCGCCATTC TCGGCATCGC CCTCCTGTCC GTCGTCACCA GCTCGTTGAT CCTGCTCGAC GTCTCCGTCT ACTGGCAGGA TATGATCAAG GGTTGCATAC TGCTCGCAGC CGTTTCGATC GATCACATGC TGCACAAGCG GAAGGCTGCC TGA
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Protein sequence | MAVDILPVAH DARRPAWKRI GTMREAGLIA IILSLCVIMS FASPHFLTLG NFRAMLMSFS VEGIVVVGMT ILLIVGGIDL SVGSVVCFSM VLSGSLFLMG VDPWTASLVG IAASAAIGCI MGFFVTVVGL NHFITSLAAM VIVRGLCLVI TKGTPLSLFT LPPAFKAVGQ GTFFGVPYVI VIFIAVVAVF DFLLRRATAF RKVFYTGSNE KAALYSGIKT KDVKFWVTVL CTTLSGVAGT IYMARFGAAT PTFGVGMELN IIAAAVIGGA SLNGGSGTIL GAILGIALLS VVTSSLILLD VSVYWQDMIK GCILLAAVSI DHMLHKRKAA
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