Gene Smed_3583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3583 
Symbol 
ID5318574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp11544 
End bp11954 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content58% 
IMG OID640775398 
Producthypothetical protein 
Protein accessionYP_001312331 
Protein GI150375735 
COG category 
COG ID 
TIGRFAM ID[TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.252528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTTC AGCCAATTGT CACGACACCA ACCGCTACAA CAGATGCGAT AACCGACGCG 
GAAGCCGGCG CGTTGGCACG TGCTGTCGTA AACCTCTCTA GAGCCTGGAA GCTCTCCGAC
GCTGAGTCGT GCATTCTCCT AGGAGGGATG TCCCCCCGCA CCTGGGCGCG GTGGAAGGAC
GGTGACATCG GCAGAATTGA TCGCGATCTC CGGATGAGGA TGGCTCACCT TATGGGCATC
CACAAAGGTC TGCGATATTT GTTCAAAGAG GCCGCACGGG GTTACGCCTG GATGCGCAAA
CCCAACGCGG CCTTCGGTGG CTTCTCGGCC CTGGATCTTA TGCTCCGCGG TGAAATATCG
GATCTTTCAG CGTTGCGCGA ATGGTTGGAT GCGGAGCGTA GTGCATGGTG A
 
Protein sequence
MQLQPIVTTP TATTDAITDA EAGALARAVV NLSRAWKLSD AESCILLGGM SPRTWARWKD 
GDIGRIDRDL RMRMAHLMGI HKGLRYLFKE AARGYAWMRK PNAAFGGFSA LDLMLRGEIS
DLSALREWLD AERSAW