Gene Smed_3546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3546 
Symbol 
ID5324434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3751749 
End bp3752696 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content63% 
IMG OID640792496 
Productglutathione synthetase 
Protein accessionYP_001329197 
Protein GI150398730 
COG category[H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) 
TIGRFAM ID[TIGR01380] glutathione synthetase, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGAA TCGTCAATGT CGGGGTCCAG ATGGACCATG TTTCGGGCAT CACCATTGCG 
GGCGATTCGA CCTTCGCGAT GAGCCTGGAG GCACAGGCCC GCGGCTACCG CCTGTTCCAC
TACACGCCCG ACAAGCTGTC GCTTCGGGAC GGCAAGGTCT ATGCGACCGC GCAGCAGATG
CAGCTGCGCG ACGTCAAGGG CGATCACTTC ACCCTCGGCG AGGACGAGCG GATCGACCTT
TCGACTCTGG ACGTCATCCT GCTTCGCCAG GATCCGCCCT TCGACATGGC CTATATCACC
TCCACCCATC TGCTCGAGCG TCTCCACCCC AAGACCTTGG TCGTCAACGA TCCGGCCTGG
GTACGGAACT CTCCGGAAAA GATCTTCGTG ACCGAATTTG CGGACCTGAT GCCGAAGACG
CTGATCACCC GCGATGCGGA CGAGATTGCC CGCTTCCGCC AGGAAATGGG GGACATCATC
CTGAAGCCGC TTTACGGCAA TGGCGGCGCG GGGGTCTTCC ACTCGGCGCG CGACGACCGC
AATTTCTCGT CGCTCCTCGA AATGTTCGCC CAGATGTTCC GCGAGCCTTA CATTGCCCAG
GAATACCTGC CGGAGGTCCG CAAGGGCGAC AAGCGCATCC TGCTCGTCGA TGGCGAGCCC
GTCGGCGCGA TCAATCGCGT CCCGGCCGAG CACGACTCGC GCTCCAACAT GCATGCTGGC
GGGCGCGCGG AGGCAACCGA GCTGACGGCG CGCGAAAGGG AAATCTGCAC CCGTATCGGG
CCGGCGCTGA AAGAACGCGG CTTCCTCTTC GTCGGCATCG ACGTCATCGG CGACTATCTG
ACGGAGATCA ACGTCACCTC GCCCACCGGC ATCCGCGAAG TGAAGAAGTT CGGCGGCGCC
GATGTCGCCG GTCTTCTCTG GGACGCGATC GAGAAAAAGC GCGCCTGA
 
Protein sequence
MAGIVNVGVQ MDHVSGITIA GDSTFAMSLE AQARGYRLFH YTPDKLSLRD GKVYATAQQM 
QLRDVKGDHF TLGEDERIDL STLDVILLRQ DPPFDMAYIT STHLLERLHP KTLVVNDPAW
VRNSPEKIFV TEFADLMPKT LITRDADEIA RFRQEMGDII LKPLYGNGGA GVFHSARDDR
NFSSLLEMFA QMFREPYIAQ EYLPEVRKGD KRILLVDGEP VGAINRVPAE HDSRSNMHAG
GRAEATELTA REREICTRIG PALKERGFLF VGIDVIGDYL TEINVTSPTG IREVKKFGGA
DVAGLLWDAI EKKRA