Gene Smed_3495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3495 
Symbol 
ID5324383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3702162 
End bp3703148 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content61% 
IMG OID640792447 
Productoxidoreductase domain-containing protein 
Protein accessionYP_001329148 
Protein GI150398681 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGTT TCGGAATTTT GTCGACAGCC AAGATCGGCC GTGAACTCGT CGTACCCGCC 
ATTCAGGACG CCGAGAACTG TGTCGTCACC GCGATCGCAA GCCGCGATCT CGCCAAGGCA
CGGGCCATGG CCGACCGCTT CTCCGTGCCG CATGCTTTCG GCTCCTATGA GGAGATGCTC
GCCTCCGATA CGATCGACGC CGTCTATATT CCGTTGCCGA CGTCACAGCA TGTCGAATGG
GCGATCAAGG CGGCGGATGC CGGAAAGCAT GTGCTCTGCG AGAAACCGCT GGCGCTGAAA
GCCGAAGAGA TCGATGCCGT GATCGCAGCG CGGGAGCGCA ACAAGGTGCT GATCTCGGAA
GCCTATATGG TGACCTACAG CCCCGTCTGG CGGAAGGTGC GCGCGCTCCT CGCCGATGGC
GCGATCGGCC GGCTCAGGCA TGTCCAGGGC GCCTTCACTT ATTATAACAG GGATCCGGGC
AACATGCGCA ACGTCCCGGC GCTTGGCGGC GGCGGCCTGC CGGATATCGG TGTTTATCCG
GCGATCTCGA CCCGTTTCAC GACCGGCAGG GAACCGTTGC GCGTGCAGGC CACCACCGAG
CGCGATCCGG AGTTCGGCAC CGACATTTAT TCGAGCGTTC GTGCTGATTT CGGCGATTTC
GAACTCAGCT TCTACATATC CACGCAGCTC GCCGCCCGCC AGGTGATGGT CTTTCACGGC
GACAAGGGGT ACATCGAAGT GAAGTCTCCC TTCAATGCTG ATCGCTACGG CCGTGAGGAG
GTGGAACTGA CCAATCAGAA CCACGGTCAA TCGCAGCTTT TCCGGTTCCA GGATGCGCGC
CAGTACAAGC TTGAGGCCGA AGCTTTCTCG CGCGCTGCGA AAGGGGAGCC GGAAGAAGTG
GTGACGCTGG AAAGTTCACG CCTCAACCAG AAATTCATAG ACGCGATCTA TCGGGCCAGC
GAAAGGGACG GCTGGGAGCC GGTCTGA
 
Protein sequence
MLRFGILSTA KIGRELVVPA IQDAENCVVT AIASRDLAKA RAMADRFSVP HAFGSYEEML 
ASDTIDAVYI PLPTSQHVEW AIKAADAGKH VLCEKPLALK AEEIDAVIAA RERNKVLISE
AYMVTYSPVW RKVRALLADG AIGRLRHVQG AFTYYNRDPG NMRNVPALGG GGLPDIGVYP
AISTRFTTGR EPLRVQATTE RDPEFGTDIY SSVRADFGDF ELSFYISTQL AARQVMVFHG
DKGYIEVKSP FNADRYGREE VELTNQNHGQ SQLFRFQDAR QYKLEAEAFS RAAKGEPEEV
VTLESSRLNQ KFIDAIYRAS ERDGWEPV